Analysis of interatomic Contacts of Structural Units in PDB entry:
1WYT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WYT entry

There are 4 chains in PDB entry 1WYT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 437
B
 SER 2ASP 472
C
 MET 1LEU 437
D
 SER 2ASP 472
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 1WYT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 18Right-handed alpha
Helix 2
2
A
23 28Right-handed 310
Helix 3
3
A
31 35Right-handed 310
Helix 4
4
A
46 59Right-handed alpha
Helix 5
5
A
79 87Right-handed alpha
Helix 6
6
A
88 93Right-handed alpha
Helix 7
7
A
99 102Right-handed 310
Helix 8
8
A
103 122Right-handed alpha
Helix 9
9
A
132 149Right-handed alpha
Helix 10
10
A
160 175Right-handed alpha
Helix 11
11
A
214 225Right-handed alpha
Helix 12
12
A
235 239Right-handed 310
Helix 13
13
A
242 247Right-handed alpha
Helix 14
14
A
262 266Right-handed 310
Helix 15
15
A
276 279Right-handed 310
Helix 16
16
A
305 312Right-handed alpha
Helix 17
17
A
323 361Right-handed alpha
Helix 18
18
A
385 396Right-handed alpha
Helix 19
19
A
422 437Right-handed alpha
Helix 20
20
B
5 10Right-handed alpha
Helix 21
21
B
25 29Right-handed 310
Helix 22
22
B
31 35Right-handed 310
Helix 23
23
B
46 59Right-handed alpha
Helix 24
24
B
81 89Right-handed alpha
Helix 25
25
B
98 101Right-handed 310
Helix 26
26
B
102 121Right-handed alpha
Helix 27
27
B
133 150Right-handed alpha
Helix 28
28
B
167 176Right-handed alpha
Helix 29
29
B
192 200Right-handed alpha
Helix 30
30
B
221 232Right-handed alpha
Helix 31
31
B
241 246Right-handed 310
Helix 32
32
B
251 256Right-handed 310
Helix 33
33
B
263 268Right-handed alpha
Helix 34
34
B
272 276Right-handed 310
Helix 35
35
B
288 292Right-handed 310
Helix 36
36
B
323 363Right-handed alpha
Helix 37
37
B
386 397Right-handed alpha
Helix 38
38
B
423 438Right-handed alpha
Helix 39
39
B
441 447Right-handed alpha
Helix 40
40
B
458 465Right-handed alpha
Helix 41
41
C
7 19Right-handed alpha
Helix 42
42
C
23 28Right-handed 310
Helix 43
43
C
46 59Right-handed alpha
Helix 44
44
C
79 87Right-handed alpha
Helix 45
45
C
88 93Right-handed alpha
Helix 46
46
C
99 102Right-handed 310
Helix 47
47
C
103 122Right-handed alpha
Helix 48
48
C
132 149Right-handed alpha
Helix 49
49
C
160 175Right-handed alpha
Helix 50
50
C
214 225Right-handed alpha
Helix 51
51
C
235 239Right-handed 310
Helix 52
52
C
262 266Right-handed 310
Helix 53
53
C
276 282Right-handed 310
Helix 54
54
C
305 312Right-handed alpha
Helix 55
55
C
323 361Right-handed alpha
Helix 56
56
C
385 396Right-handed alpha
Helix 57
57
C
405 409Right-handed 310
Helix 58
58
C
422 437Right-handed alpha
Helix 59
59
D
25 30Right-handed alpha
Helix 60
60
D
31 35Right-handed 310
Helix 61
61
D
46 59Right-handed alpha
Helix 62
62
D
81 89Right-handed alpha
Helix 63
63
D
98 101Right-handed 310
Helix 64
64
D
102 121Right-handed alpha
Helix 65
65
D
133 150Right-handed alpha
Helix 66
66
D
167 176Right-handed alpha
Helix 67
67
D
192 200Right-handed alpha
Helix 68
68
D
221 232Right-handed alpha
Helix 69
69
D
241 246Right-handed 310
Helix 70
70
D
251 256Right-handed 310
Helix 71
71
D
286 292Right-handed 310
Helix 72
72
D
323 363Right-handed alpha
Helix 73
73
D
386 397Right-handed alpha
Helix 74
74
D
423 438Right-handed alpha
Helix 75
75
D
441 447Right-handed alpha
Helix 76
76
D
458 465Right-handed alpha
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There are 12 sheets in PDB entry 1WYT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 126first strand
Strand 2
A
270 274anti-parallel
Strand 3
A
250 254anti-parallel
Strand 4
A
227 231parallel
Strand 5
A
197 203parallel
Strand 6
A
152 156parallel
Strand 7
A
177 181parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 291first strand
Strand 2
A
297 301anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 368first strand
Strand 2
A
377 381anti-parallel
Strand 3
A
412 416anti-parallel
Strand 4
A
402 403anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 126first strand
Strand 2
B
282 284anti-parallel
Strand 3
B
259 261anti-parallel
Strand 4
B
235 239parallel
Strand 5
B
204 210parallel
Strand 6
B
158 162parallel
Strand 7
B
179 183parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
296 299first strand
Strand 2
B
304 307anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
377 379first strand
Strand 2
B
414 416anti-parallel
Strand 3
B
403 404anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
125 126first strand
Strand 2
C
270 274anti-parallel
Strand 3
C
250 254anti-parallel
Strand 4
C
227 231parallel
Strand 5
C
197 203parallel
Strand 6
C
152 156parallel
Strand 7
C
177 181parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
287 291first strand
Strand 2
C
297 301anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
367 368first strand
Strand 2
C
377 381anti-parallel
Strand 3
C
412 416anti-parallel
Strand 4
C
402 403anti-parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
124 126first strand
Strand 2
D
282 284anti-parallel
Strand 3
D
259 261anti-parallel
Strand 4
D
235 239parallel
Strand 5
D
204 209parallel
Strand 6
D
158 162parallel
Strand 7
D
179 183parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
296 300first strand
Strand 2
D
303 307anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
377 379first strand
Strand 2
D
414 416anti-parallel
Strand 3
D
403 404anti-parallel
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