Analysis of interatomic Contacts of Structural Units in PDB entry:
1WZC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WZC entry

There are 2 chains in PDB entry 1WZC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1HIS 244
B
MET 1HIS 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 1WZC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
19 21Right-handed 310
Helix 2
2
A
22 32Right-handed alpha
Helix 3
3
A
43 55Right-handed alpha
Helix 4
4
A
95 111Right-handed alpha
Helix 5
5
A
114 118Right-handed 310
Helix 6
6
A
119 128Right-handed alpha
Helix 7
7
A
130 132Right-handed 310
Helix 8
8
A
133 138Right-handed alpha
Helix 9
9
A
153 161Right-handed alpha
Helix 10
10
A
179 193Right-handed alpha
Helix 11
11
A
205 207Right-handed 310
Helix 12
12
A
208 213Right-handed alpha
Helix 13
13
A
234 243Right-handed alpha
Helix 14
14
B
19 21Right-handed 310
Helix 15
15
B
22 32Right-handed alpha
Helix 16
16
B
43 55Right-handed alpha
Helix 17
17
B
95 111Right-handed alpha
Helix 18
18
B
114 118Right-handed 310
Helix 19
19
B
119 128Right-handed alpha
Helix 20
20
B
133 138Right-handed alpha
Helix 21
21
B
153 161Right-handed alpha
Helix 22
22
B
179 193Right-handed alpha
Helix 23
23
B
205 207Right-handed 310
Helix 24
24
B
208 213Right-handed alpha
Helix 25
25
B
234 244Right-handed alpha
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There are 4 sheets in PDB entry 1WZC. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
88 91first strand
Strand 2
A
67 70anti-parallel
Strand 3
A
60 62anti-parallel
Strand 4
A
34 39parallel
Strand 5
A
2 7parallel
Strand 6
A
197 203parallel
Strand 7
A
217 221parallel
Strand 8
A
230 232parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
143 146first strand
Strand 2
A
172 175anti-parallel
Strand 3
A
164 167anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
82 84first strand
Strand 2
B
87 91anti-parallel
Strand 3
B
67 71anti-parallel
Strand 4
B
60 62anti-parallel
Strand 5
B
34 39parallel
Strand 6
B
2 7parallel
Strand 7
B
197 203parallel
Strand 8
B
217 221parallel
Strand 9
B
230 232parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
144 146first strand
Strand 2
B
172 175anti-parallel
Strand 3
B
164 167anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il