Analysis of interatomic Contacts of Structural Units in PDB entry:
1X2B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1X2B entry

There is 1 chain in PDB entry 1X2B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 4GLY 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 1X2B. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
52 59Right-handed 310
Helix 2
2
A
87 102Right-handed alpha
Helix 3
3
A
113 126Right-handed alpha
Helix 4
4
A
142 151Right-handed alpha
Helix 5
5
A
153 157Right-handed 310
Helix 6
6
A
158 167Right-handed alpha
Helix 7
7
A
172 175Right-handed 310
Helix 8
8
A
176 186Right-handed alpha
Helix 9
9
A
189 206Right-handed alpha
Helix 10
10
A
213 220Right-handed 310
Helix 11
11
A
221 238Right-handed alpha
Helix 12
12
A
239 242Right-handed 310
Helix 13
13
A
246 251Right-handed alpha
Helix 14
14
A
252 256Right-handed 310
Helix 15
15
A
272 283Right-handed alpha
Helix 16
16
A
300 316Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1X2B.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
15 20first strand
Strand 2
A
26 33anti-parallel
Strand 3
A
64 69anti-parallel
Strand 4
A
38 43parallel
Strand 5
A
107 112parallel
Strand 6
A
130 136parallel
Strand 7
A
260 265parallel
Strand 8
A
287 291parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il