Analysis of interatomic Contacts of Structural Units in PDB entry:
1XAC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XAC entry

There is 1 chain in PDB entry 1XAC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1ALA 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 1XAC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
12 30Right-handed alpha
Helix 2
2
A
43 49Right-handed alpha
Helix 3
3
A
55 63Right-handed alpha
Helix 4
4
A
75 77Right-handed 310
Helix 5
5
A
88 96Right-handed alpha
Helix 6
6
A
110 115Right-handed 310
Helix 7
7
A
120 123Right-handed alpha
Helix 8
8
A
137 139Right-handed 310
Helix 9
9
A
159 174Right-handed alpha
Helix 10
10
A
190 206Right-handed alpha
Helix 11
11
A
216 225Right-handed alpha
Helix 12
12
A
227 229Right-handed 310
Helix 13
13
A
237 249Right-handed alpha
Helix 14
14
A
277 279Right-handed 310
Helix 15
15
A
288 302Right-handed alpha
Helix 16
16
A
305 321Right-handed alpha
Helix 17
17
A
325 327Right-handed 310
Helix 18
18
A
333 343Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1XAC.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
35 38first strand
Strand 2
A
2 6parallel
Strand 3
A
66 69parallel
Strand 4
A
267 271parallel
Strand 5
A
258 263anti-parallel
Strand 6
A
99 107anti-parallel
Strand 7
A
127 133anti-parallel
Strand 8
A
232 235parallel
Strand 9
A
179 184parallel
Strand 10
A
210 215parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il