Analysis of interatomic Contacts of Structural Units in PDB entry:
1XE8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XE8 entry

There are 3 chains in PDB entry 1XE8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9HIS 202
B
 GLN 6HIS 202
C
 ALA 9HIS 203
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 1XE8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 21Right-handed alpha
Helix 2
2
A
27 38Right-handed alpha
Helix 3
3
A
130 134Right-handed 310
Helix 4
4
A
172 174Right-handed 310
Helix 5
5
A
180 197Right-handed alpha
Helix 6
6
A
198 201Right-handed 310
Helix 7
7
B
16 21Right-handed alpha
Helix 8
8
B
27 37Right-handed alpha
Helix 9
9
B
130 134Right-handed 310
Helix 10
10
B
172 174Right-handed 310
Helix 11
11
B
182 187Right-handed alpha
Helix 12
12
B
190 197Right-handed alpha
Helix 13
13
C
16 21Right-handed alpha
Helix 14
14
C
27 38Right-handed alpha
Helix 15
15
C
154 158Right-handed 310
Helix 16
16
C
172 174Right-handed 310
Helix 17
17
C
181 190Right-handed alpha
Helix 18
18
C
190 197Right-handed alpha
Helix 19
19
C
198 201Right-handed 310
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There are 9 sheets in PDB entry 1XE8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
47 53anti-parallel
Strand 3
A
80 86anti-parallel
Strand 4
A
161 167anti-parallel
Strand 5
A
102 109anti-parallel
Strand 6
A
138 141anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 62first strand
Strand 2
A
72 77anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 127first strand
Strand 2
A
111 116anti-parallel
Strand 3
A
146 151anti-parallel
Strand 4
A
92 98anti-parallel
Strand 5
A
176 178anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 41first strand
Strand 2
B
47 53anti-parallel
Strand 3
B
80 86anti-parallel
Strand 4
B
161 167anti-parallel
Strand 5
B
102 109anti-parallel
Strand 6
B
138 141anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 63first strand
Strand 2
B
71 77anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 127first strand
Strand 2
B
111 116anti-parallel
Strand 3
B
146 151anti-parallel
Strand 4
B
92 98anti-parallel
Strand 5
B
176 177anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 41first strand
Strand 2
C
47 53anti-parallel
Strand 3
C
80 86anti-parallel
Strand 4
C
161 167anti-parallel
Strand 5
C
102 109anti-parallel
Strand 6
C
138 141anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 62first strand
Strand 2
C
72 77anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
122 127first strand
Strand 2
C
111 116anti-parallel
Strand 3
C
146 151anti-parallel
Strand 4
C
92 98anti-parallel
Strand 5
C
176 178anti-parallel
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