Analysis of interatomic Contacts of Structural Units in PDB entry:
1XI6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XI6 entry

There is 1 chain in PDB entry 1XI6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 2LEU 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1XI6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
2 21Right-handed alpha
Helix 2
2
A
22 25Right-handed 310
Helix 3
3
A
27 32Right-handed 310
Helix 4
4
A
44 59Right-handed alpha
Helix 5
5
A
60 62Right-handed 310
Helix 6
6
A
88 95Right-handed alpha
Helix 7
7
A
163 167Right-handed 310
Helix 8
8
A
175 186Right-handed alpha
Helix 9
9
A
199 212Right-handed alpha
Helix 10
10
A
242 250Right-handed alpha
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There are 2 sheets in PDB entry 1XI6. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
71 73first strand
Strand 2
A
64 67anti-parallel
Strand 3
A
79 87parallel
Strand 4
A
100 107anti-parallel
Strand 5
A
110 118anti-parallel
Strand 6
A
123 128anti-parallel
Strand 7
A
132 135anti-parallel
Strand 8
A
138 139anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
170 171first strand
Strand 2
A
152 155parallel
Strand 3
A
190 198parallel
Strand 4
A
235 240anti-parallel
Strand 5
A
216 218anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il