Analysis of interatomic Contacts of Structural Units in PDB entry:
1XJP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XJP entry

There are 2 chains in PDB entry 1XJP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 17SER 680
B
 SER 19ASP 615
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 1XJP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
69 78Right-handed alpha
Helix 2
2
A
79 87Right-handed alpha
Helix 3
3
A
87 95Right-handed alpha
Helix 4
4
A
97 105Right-handed alpha
Helix 5
5
A
208 213Right-handed alpha
Helix 6
6
A
241 245Right-handed 310
Helix 7
7
A
250 254Right-handed 310
Helix 8
8
A
257 266Right-handed alpha
Helix 9
9
A
291 295Right-handed 310
Helix 10
10
A
311 323Right-handed alpha
Helix 11
11
A
354 358Right-handed 310
Helix 12
12
A
369 373Right-handed 310
Helix 13
13
A
391 395Right-handed 310
Helix 14
14
A
447 452Right-handed alpha
Helix 15
15
A
497 505Right-handed alpha
Helix 16
16
A
534 542Right-handed alpha
Helix 17
17
A
549 564Right-handed alpha
Helix 18
18
A
589 594Right-handed alpha
Helix 19
19
A
603 608Right-handed alpha
Helix 20
20
A
639 644Right-handed alpha
Helix 21
21
A
648 656Right-handed alpha
Helix 22
22
A
660 671Right-handed alpha
Helix 23
23
A
671 680Right-handed alpha
Helix 24
24
B
22 53Right-handed alpha
Helix 25
25
B
55 78Right-handed alpha
Helix 26
26
B
90 101Right-handed alpha
Helix 27
27
B
103 108Right-handed 310
Helix 28
28
B
109 130Right-handed alpha
Helix 29
29
B
147 155Right-handed alpha
Helix 30
30
B
157 172Right-handed alpha
Helix 31
31
B
172 194Right-handed alpha
Helix 32
32
B
198 205Right-handed alpha
Helix 33
33
B
219 252Right-handed alpha
Helix 34
34
B
265 267Right-handed 310
Helix 35
35
B
275 277Right-handed 310
Helix 36
36
B
278 283Right-handed alpha
Helix 37
37
B
297 301Right-handed 310
Helix 38
38
B
303 317Right-handed alpha
Helix 39
39
B
326 331Right-handed alpha
Helix 40
40
B
365 385Right-handed alpha
Helix 41
41
B
389 393Right-handed 310
Helix 42
42
B
399 414Right-handed alpha
Helix 43
43
B
414 421Right-handed alpha
Helix 44
44
B
431 447Right-handed alpha
Helix 45
45
B
448 466Right-handed alpha
Helix 46
46
B
469 471Right-handed 310
Helix 47
47
B
472 484Right-handed alpha
Helix 48
48
B
498 502Right-handed 310
Helix 49
49
B
503 508Right-handed alpha
Helix 50
50
B
513 532Right-handed alpha
Helix 51
51
B
538 542Right-handed 310
Helix 52
52
B
547 559Right-handed alpha
Helix 53
53
B
565 575Right-handed alpha
Helix 54
54
B
581 599Right-handed alpha
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There are 4 sheets in PDB entry 1XJP. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
621 622parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 134first strand
Strand 2
B
137 143anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
487 488parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 352first strand
Strand 2
B
355 359anti-parallel
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