Analysis of interatomic Contacts of Structural Units in PDB entry:
1XMX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XMX entry

There is 1 chain in PDB entry 1XMX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -1ASN 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1XMX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 21Right-handed alpha
Helix 2
2
A
34 36Right-handed 310
Helix 3
3
A
37 51Right-handed alpha
Helix 4
4
A
65 84Right-handed alpha
Helix 5
5
A
95 109Right-handed alpha
Helix 6
6
A
141 149Right-handed alpha
Helix 7
7
A
161 178Right-handed alpha
Helix 8
8
A
178 200Right-handed alpha
Helix 9
9
A
207 212Right-handed alpha
Helix 10
10
A
213 226Right-handed alpha
Helix 11
11
A
240 249Right-handed alpha
Helix 12
12
A
250 265Right-handed alpha
Helix 13
13
A
318 332Right-handed alpha
Helix 14
14
A
333 335Right-handed 310
Helix 15
15
A
346 357Right-handed alpha
Helix 16
16
A
362 367Right-handed 310
Helix 17
17
A
368 379Right-handed alpha
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There are 3 sheets in PDB entry 1XMX. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 59first strand
Strand 2
A
28 33parallel
Strand 3
A
2 7parallel
Strand 4
A
86 90parallel
Strand 5
A
113 116parallel
Strand 6
A
122 127anti-parallel
Strand 7
A
134 135anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
270 283anti-parallel
Strand 3
A
286 298anti-parallel
Strand 4
A
301 308anti-parallel
Strand 5
A
336 341parallel
Strand 6
A
359 361parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 205first strand
Strand 2
A
235 238anti-parallel
Strand 3
A
229 232anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il