Analysis of interatomic Contacts of Structural Units in PDB entry:
1XO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XO1 entry

There are 2 chains in PDB entry 1XO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 19GLU 290
B
ARG 19GLU 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1XO1. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
27 33Right-handed alpha
Helix 2
2
A
44 57Right-handed alpha
Helix 3
3
A
73 76Right-handed alpha
Helix 4
4
A
105 117Right-handed alpha
Helix 5
5
A
129 143Right-handed alpha
Helix 6
6
A
154 159Right-handed 310
Helix 7
7
A
177 184Right-handed 310
Helix 8
8
A
189 199Right-handed alpha
Helix 9
9
A
202 204Right-handed 310
Helix 10
10
A
214 224Right-handed alpha
Helix 11
11
A
227 233Right-handed alpha
Helix 12
12
A
241 248Right-handed alpha
Helix 13
13
A
250 260Right-handed alpha
Helix 14
14
A
262 273Right-handed alpha
Helix 15
15
A
275 288Right-handed alpha
Helix 16
16
B
27 33Right-handed alpha
Helix 17
17
B
44 57Right-handed alpha
Helix 18
18
B
73 78Right-handed alpha
Helix 19
19
B
105 117Right-handed alpha
Helix 20
20
B
129 143Right-handed alpha
Helix 21
21
B
154 158Right-handed 310
Helix 22
22
B
177 184Right-handed 310
Helix 23
23
B
189 199Right-handed alpha
Helix 24
24
B
202 204Right-handed 310
Helix 25
25
B
214 224Right-handed alpha
Helix 26
26
B
227 233Right-handed alpha
Helix 27
27
B
241 248Right-handed alpha
Helix 28
28
B
250 260Right-handed alpha
Helix 29
29
B
262 273Right-handed alpha
Helix 30
30
B
275 288Right-handed alpha
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There are 2 sheets in PDB entry 1XO1. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
164 167first strand
Strand 2
A
147 150first strand
Strand 3
A
21 26parallel
Strand 4
A
60 67parallel
Strand 5
A
120 123parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
164 167first strand
Strand 2
B
147 150first strand
Strand 3
B
21 26parallel
Strand 4
B
60 66parallel
Strand 5
B
120 122parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il