Analysis of interatomic Contacts of Structural Units in PDB entry:
1XPJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XPJ entry

There are 4 chains in PDB entry 1XPJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 124
B
 MET 1LYS 123
C
 MET 1LYS 123
D
 MET 1LYS 123
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 1XPJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 23Right-handed 310
Helix 2
2
A
26 39Right-handed alpha
Helix 3
3
A
57 65Right-handed alpha
Helix 4
4
A
65 76Right-handed alpha
Helix 5
5
A
103 110Right-handed alpha
Helix 6
6
A
111 121Right-handed alpha
Helix 7
7
A
122 124Right-handed 310
Helix 8
8
B
19 23Right-handed 310
Helix 9
9
B
26 39Right-handed alpha
Helix 10
10
B
57 65Right-handed alpha
Helix 11
11
B
65 76Right-handed alpha
Helix 12
12
B
103 110Right-handed alpha
Helix 13
13
B
111 121Right-handed alpha
Helix 14
14
C
19 23Right-handed 310
Helix 15
15
C
26 39Right-handed alpha
Helix 16
16
C
57 65Right-handed alpha
Helix 17
17
C
65 76Right-handed alpha
Helix 18
18
C
103 110Right-handed alpha
Helix 19
19
C
111 121Right-handed alpha
Helix 20
20
D
19 23Right-handed 310
Helix 21
21
D
26 39Right-handed alpha
Helix 22
22
D
57 65Right-handed alpha
Helix 23
23
D
65 76Right-handed alpha
Helix 24
24
D
103 110Right-handed alpha
Helix 25
25
D
111 123Right-handed alpha
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There are 4 sheets in PDB entry 1XPJ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 85first strand
Strand 2
A
42 47parallel
Strand 3
A
3 6parallel
Strand 4
D
95 97parallel
Strand 5
A
101 102parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
82 85first strand
Strand 2
D
42 47parallel
Strand 3
D
3 6parallel
Strand 4
A
95 97parallel
Strand 5
D
101 102parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 84first strand
Strand 2
B
42 46parallel
Strand 3
B
3 6parallel
Strand 4
C
95 97parallel
Strand 5
B
101 102parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 84first strand
Strand 2
C
42 46parallel
Strand 3
C
3 6parallel
Strand 4
B
95 97parallel
Strand 5
C
101 102parallel
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