Analysis of interatomic Contacts of Structural Units in PDB entry:
1XTI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XTI entry

There is 1 chain in PDB entry 1XTI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 46GLN 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1XTI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
46 51Right-handed 310
Helix 2
2
A
53 64Right-handed alpha
Helix 3
3
A
69 80Right-handed alpha
Helix 4
4
A
94 107Right-handed alpha
Helix 5
5
A
122 137Right-handed alpha
Helix 6
6
A
153 164Right-handed alpha
Helix 7
7
A
172 182Right-handed alpha
Helix 8
8
A
197 202Right-handed alpha
Helix 9
9
A
204 217Right-handed alpha
Helix 10
10
A
234 243Right-handed alpha
Helix 11
11
A
270 272Right-handed 310
Helix 12
12
A
273 285Right-handed alpha
Helix 13
13
A
296 310Right-handed alpha
Helix 14
14
A
322 335Right-handed alpha
Helix 15
15
A
367 376Right-handed alpha
Helix 16
16
A
393 407Right-handed alpha
Helix 17
17
A
419 423Right-handed 310
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There are 2 sheets in PDB entry 1XTI. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 148first strand
Strand 2
A
168 171parallel
Strand 3
A
116 119parallel
Strand 4
A
192 195parallel
Strand 5
A
223 228parallel
Strand 6
A
85 88parallel
Strand 7
A
247 250parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 317first strand
Strand 2
A
340 343parallel
Strand 3
A
289 293parallel
Strand 4
A
356 361parallel
Strand 5
A
386 391parallel
Strand 6
A
263 268parallel
Strand 7
A
412 413parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il