Analysis of interatomic Contacts of Structural Units in PDB entry:
1XU8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XU8 entry

There are 2 chains in PDB entry 1XU8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0PRO 375
B
 SER 0PRO 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1XU8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 23Right-handed alpha
Helix 2
2
A
31 46Right-handed alpha
Helix 3
3
A
47 58Right-handed alpha
Helix 4
4
A
65 81Right-handed alpha
Helix 5
5
A
101 107Right-handed alpha
Helix 6
6
A
124 140Right-handed alpha
Helix 7
7
A
176 180Right-handed 310
Helix 8
8
A
222 224Right-handed 310
Helix 9
9
A
238 249Right-handed alpha
Helix 10
10
A
251 259Right-handed alpha
Helix 11
11
A
284 292Right-handed alpha
Helix 12
12
B
4 23Right-handed alpha
Helix 13
13
B
31 46Right-handed alpha
Helix 14
14
B
47 58Right-handed alpha
Helix 15
15
B
65 81Right-handed alpha
Helix 16
16
B
101 109Right-handed alpha
Helix 17
17
B
124 140Right-handed alpha
Helix 18
18
B
176 180Right-handed 310
Helix 19
19
B
222 224Right-handed 310
Helix 20
20
B
238 249Right-handed alpha
Helix 21
21
B
251 260Right-handed alpha
Helix 22
22
B
284 291Right-handed alpha
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There are 6 sheets in PDB entry 1XU8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
366 372anti-parallel
Strand 3
A
354 360anti-parallel
Strand 4
A
226 233anti-parallel
Strand 5
A
214 220anti-parallel
Strand 6
A
192 209anti-parallel
Strand 7
A
181 186anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
366 372anti-parallel
Strand 3
A
354 360anti-parallel
Strand 4
A
226 233anti-parallel
Strand 5
A
214 220anti-parallel
Strand 6
A
192 209anti-parallel
Strand 7
A
265 274anti-parallel
Strand 8
A
345 349parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 119first strand
Strand 2
A
86 95parallel
Strand 3
A
159 168anti-parallel
Strand 4
A
315 326parallel
Strand 5
A
276 282anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 30first strand
Strand 2
B
366 372anti-parallel
Strand 3
B
354 360anti-parallel
Strand 4
B
226 233anti-parallel
Strand 5
B
214 220anti-parallel
Strand 6
B
192 209anti-parallel
Strand 7
B
181 186anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 30first strand
Strand 2
B
366 372anti-parallel
Strand 3
B
354 360anti-parallel
Strand 4
B
226 233anti-parallel
Strand 5
B
214 220anti-parallel
Strand 6
B
192 209anti-parallel
Strand 7
B
265 274anti-parallel
Strand 8
B
344 349parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 119first strand
Strand 2
B
85 95parallel
Strand 3
B
159 168anti-parallel
Strand 4
B
315 326parallel
Strand 5
B
276 282anti-parallel
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