Analysis of interatomic Contacts of Structural Units in PDB entry:
1XVX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XVX entry

There is 1 chain in PDB entry 1XVX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1XVX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 30Right-handed alpha
Helix 2
2
A
39 51Right-handed alpha
Helix 3
3
A
52 54Right-handed 310
Helix 4
4
A
64 73Right-handed alpha
Helix 5
5
A
80 87Right-handed alpha
Helix 6
6
A
88 92Right-handed 310
Helix 7
7
A
116 120Right-handed 310
Helix 8
8
A
123 133Right-handed 310
Helix 9
9
A
142 157Right-handed alpha
Helix 10
10
A
157 171Right-handed alpha
Helix 11
11
A
177 187Right-handed alpha
Helix 12
12
A
197 205Right-handed alpha
Helix 13
13
A
223 226Right-handed 310
Helix 14
14
A
241 254Right-handed alpha
Helix 15
15
A
254 264Right-handed alpha
Helix 16
16
A
283 287Right-handed 310
Helix 17
17
A
293 297Right-handed 310
Helix 18
18
A
298 309Right-handed alpha
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There are 2 sheets in PDB entry 1XVX. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
7 11parallel
Strand 3
A
58 61parallel
Strand 4
A
228 235anti-parallel
Strand 5
A
99 110anti-parallel
Strand 6
A
192 196anti-parallel
Strand 7
A
136 138parallel
Strand 8
A
172 174parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
7 11parallel
Strand 3
A
58 61parallel
Strand 4
A
228 235anti-parallel
Strand 5
A
99 110anti-parallel
Strand 6
A
215 217anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il