Analysis of interatomic Contacts of Structural Units in PDB entry:
1XW8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XW8 entry

There is 1 chain in PDB entry 1XW8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1HIS 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 1XW8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 23Right-handed alpha
Helix 2
2
A
36 51Right-handed alpha
Helix 3
3
A
74 96Right-handed alpha
Helix 4
4
A
106 114Right-handed alpha
Helix 5
5
A
116 131Right-handed alpha
Helix 6
6
A
142 151Right-handed alpha
Helix 7
7
A
186 198Right-handed alpha
Helix 8
8
A
224 235Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 1XW8. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 9first strand
Strand 2
A
25 29parallel
Strand 3
A
53 57parallel
Strand 4
A
100 103parallel
Strand 5
A
135 139parallel
Strand 6
A
155 159parallel
Strand 7
A
214 216parallel
Strand 8
A
4 9parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 201first strand
Strand 2
A
207 209anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il