Analysis of interatomic Contacts of Structural Units in PDB entry:
1XXX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XXX entry

There are 8 chains in PDB entry 1XXX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5ARG 300
B
 PHE 6ARG 300
C
 GLY 5ARG 300
D
 PHE 6ARG 300
E
 PHE 6ARG 300
F
 GLY 5ARG 300
G
 PHE 6ARG 300
H
 GLY 5ARG 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are114 helices in PDB entry 1XXX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 13Right-handed alpha
Helix 2
2
A
30 44Right-handed alpha
Helix 3
3
A
62 78Right-handed alpha
Helix 4
4
A
91 106Right-handed alpha
Helix 5
5
A
121 134Right-handed alpha
Helix 6
6
A
145 150Right-handed alpha
Helix 7
7
A
154 163Right-handed alpha
Helix 8
8
A
176 188Right-handed alpha
Helix 9
9
A
195 197Right-handed 310
Helix 10
10
A
198 206Right-handed alpha
Helix 11
11
A
214 231Right-handed alpha
Helix 12
12
A
233 255Right-handed alpha
Helix 13
13
A
255 267Right-handed alpha
Helix 14
14
A
282 296Right-handed alpha
Helix 15
15
B
7 13Right-handed alpha
Helix 16
16
B
30 44Right-handed alpha
Helix 17
17
B
62 78Right-handed alpha
Helix 18
18
B
91 106Right-handed alpha
Helix 19
19
B
121 136Right-handed alpha
Helix 20
20
B
145 150Right-handed alpha
Helix 21
21
B
154 163Right-handed alpha
Helix 22
22
B
176 188Right-handed alpha
Helix 23
23
B
195 197Right-handed 310
Helix 24
24
B
198 206Right-handed alpha
Helix 25
25
B
214 232Right-handed alpha
Helix 26
26
B
233 268Right-handed alpha
Helix 27
27
B
282 296Right-handed alpha
Helix 28
28
C
7 13Right-handed alpha
Helix 29
29
C
30 45Right-handed alpha
Helix 30
30
C
62 78Right-handed alpha
Helix 31
31
C
91 106Right-handed alpha
Helix 32
32
C
121 136Right-handed alpha
Helix 33
33
C
145 150Right-handed alpha
Helix 34
34
C
154 162Right-handed alpha
Helix 35
35
C
176 188Right-handed alpha
Helix 36
36
C
195 197Right-handed 310
Helix 37
37
C
198 205Right-handed alpha
Helix 38
38
C
214 231Right-handed alpha
Helix 39
39
C
233 255Right-handed alpha
Helix 40
40
C
255 267Right-handed alpha
Helix 41
41
C
282 296Right-handed alpha
Helix 42
42
D
7 13Right-handed alpha
Helix 43
43
D
30 45Right-handed alpha
Helix 44
44
D
62 78Right-handed alpha
Helix 45
45
D
91 106Right-handed alpha
Helix 46
46
D
121 135Right-handed alpha
Helix 47
47
D
145 150Right-handed alpha
Helix 48
48
D
154 163Right-handed alpha
Helix 49
49
D
176 188Right-handed alpha
Helix 50
50
D
195 197Right-handed 310
Helix 51
51
D
198 205Right-handed alpha
Helix 52
52
D
214 231Right-handed alpha
Helix 53
53
D
233 244Right-handed alpha
Helix 54
54
D
244 255Right-handed alpha
Helix 55
55
D
255 268Right-handed alpha
Helix 56
56
D
282 296Right-handed alpha
Helix 57
57
E
7 13Right-handed alpha
Helix 58
58
E
30 45Right-handed alpha
Helix 59
59
E
62 78Right-handed alpha
Helix 60
60
E
91 106Right-handed alpha
Helix 61
61
E
121 136Right-handed alpha
Helix 62
62
E
145 150Right-handed alpha
Helix 63
63
E
154 163Right-handed alpha
Helix 64
64
E
176 188Right-handed alpha
Helix 65
65
E
195 197Right-handed 310
Helix 66
66
E
198 205Right-handed alpha
Helix 67
67
E
214 231Right-handed alpha
Helix 68
68
E
233 255Right-handed alpha
Helix 69
69
E
255 267Right-handed alpha
Helix 70
70
E
282 296Right-handed alpha
Helix 71
71
F
7 13Right-handed alpha
Helix 72
72
F
30 44Right-handed alpha
Helix 73
73
F
57 61Right-handed 310
Helix 74
74
F
62 78Right-handed alpha
Helix 75
75
F
91 106Right-handed alpha
Helix 76
76
F
121 136Right-handed alpha
Helix 77
77
F
145 150Right-handed alpha
Helix 78
78
F
154 163Right-handed alpha
Helix 79
79
F
176 188Right-handed alpha
Helix 80
80
F
195 197Right-handed 310
Helix 81
81
F
198 205Right-handed alpha
Helix 82
82
F
214 232Right-handed alpha
Helix 83
83
F
233 255Right-handed alpha
Helix 84
84
F
255 267Right-handed alpha
Helix 85
85
F
282 296Right-handed alpha
Helix 86
86
G
7 13Right-handed alpha
Helix 87
87
G
30 45Right-handed alpha
Helix 88
88
G
62 78Right-handed alpha
Helix 89
89
G
91 106Right-handed alpha
Helix 90
90
G
121 136Right-handed alpha
Helix 91
91
G
145 150Right-handed alpha
Helix 92
92
G
154 163Right-handed alpha
Helix 93
93
G
176 188Right-handed alpha
Helix 94
94
G
195 197Right-handed 310
Helix 95
95
G
198 205Right-handed alpha
Helix 96
96
G
214 231Right-handed alpha
Helix 97
97
G
233 244Right-handed alpha
Helix 98
98
G
244 255Right-handed alpha
Helix 99
99
G
255 268Right-handed alpha
Helix 100
100
G
282 296Right-handed alpha
Helix 101
101
H
7 13Right-handed alpha
Helix 102
102
H
30 44Right-handed alpha
Helix 103
103
H
62 78Right-handed alpha
Helix 104
104
H
91 106Right-handed alpha
Helix 105
105
H
121 134Right-handed alpha
Helix 106
106
H
145 150Right-handed alpha
Helix 107
107
H
154 163Right-handed alpha
Helix 108
108
H
176 188Right-handed alpha
Helix 109
109
H
195 197Right-handed 310
Helix 110
110
H
198 205Right-handed alpha
Helix 111
111
H
214 231Right-handed alpha
Helix 112
112
H
233 255Right-handed alpha
Helix 113
113
H
255 267Right-handed alpha
Helix 114
114
H
282 296Right-handed alpha
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There are 8 sheets in PDB entry 1XXX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 18first strand
Strand 2
A
48 51parallel
Strand 3
A
82 86parallel
Strand 4
A
109 113parallel
Strand 5
A
140 144parallel
Strand 6
A
167 172parallel
Strand 7
A
190 193parallel
Strand 8
A
209 212parallel
Strand 9
A
15 18parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 18first strand
Strand 2
B
48 51parallel
Strand 3
B
82 86parallel
Strand 4
B
109 113parallel
Strand 5
B
140 144parallel
Strand 6
B
167 172parallel
Strand 7
B
190 193parallel
Strand 8
B
209 212parallel
Strand 9
B
15 18parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 18first strand
Strand 2
C
48 51parallel
Strand 3
C
82 86parallel
Strand 4
C
109 113parallel
Strand 5
C
140 144parallel
Strand 6
C
167 172parallel
Strand 7
C
190 193parallel
Strand 8
C
209 212parallel
Strand 9
C
15 18parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
15 18first strand
Strand 2
D
48 51parallel
Strand 3
D
82 86parallel
Strand 4
D
109 113parallel
Strand 5
D
140 144parallel
Strand 6
D
167 172parallel
Strand 7
D
190 193parallel
Strand 8
D
209 212parallel
Strand 9
D
15 18parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
15 18first strand
Strand 2
E
48 51parallel
Strand 3
E
82 86parallel
Strand 4
E
109 113parallel
Strand 5
E
140 144parallel
Strand 6
E
167 172parallel
Strand 7
E
190 193parallel
Strand 8
E
209 212parallel
Strand 9
E
15 18parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
15 18first strand
Strand 2
F
48 51parallel
Strand 3
F
82 86parallel
Strand 4
F
109 113parallel
Strand 5
F
140 144parallel
Strand 6
F
167 172parallel
Strand 7
F
190 193parallel
Strand 8
F
209 212parallel
Strand 9
F
15 18parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
15 18first strand
Strand 2
G
48 51parallel
Strand 3
G
82 86parallel
Strand 4
G
109 113parallel
Strand 5
G
140 144parallel
Strand 6
G
167 172parallel
Strand 7
G
190 193parallel
Strand 8
G
209 212parallel
Strand 9
G
15 18parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
15 18first strand
Strand 2
H
48 51parallel
Strand 3
H
82 86parallel
Strand 4
H
109 113parallel
Strand 5
H
140 144parallel
Strand 6
H
167 172parallel
Strand 7
H
190 193parallel
Strand 8
H
209 212parallel
Strand 9
H
15 18parallel
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