Analysis of interatomic Contacts of Structural Units in PDB entry:
1XYZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XYZ entry

There are 2 chains in PDB entry 1XYZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 516MET 835
B
 ASN 516MET 835
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1XYZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
518 525Right-handed alpha
Helix 2
2
A
535 539Right-handed 310
Helix 3
3
A
543 552Right-handed alpha
Helix 4
4
A
564 567Right-handed alpha
Helix 5
5
A
577 589Right-handed alpha
Helix 6
6
A
606 609Right-handed alpha
Helix 7
7
A
615 632Right-handed alpha
Helix 8
8
A
658 663Right-handed alpha
Helix 9
9
A
667 678Right-handed alpha
Helix 10
10
A
696 711Right-handed alpha
Helix 11
11
A
730 746Right-handed alpha
Helix 12
12
A
765 785Right-handed alpha
Helix 13
13
A
804 807Right-handed alpha
Helix 14
14
A
825 834Right-handed alpha
Helix 15
15
B
518 525Right-handed alpha
Helix 16
16
B
535 539Right-handed 310
Helix 17
17
B
543 552Right-handed alpha
Helix 18
18
B
564 567Right-handed alpha
Helix 19
19
B
577 589Right-handed alpha
Helix 20
20
B
606 609Right-handed alpha
Helix 21
21
B
615 632Right-handed alpha
Helix 22
22
B
658 663Right-handed alpha
Helix 23
23
B
667 678Right-handed alpha
Helix 24
24
B
696 710Right-handed alpha
Helix 25
25
B
730 746Right-handed alpha
Helix 26
26
B
765 785Right-handed alpha
Helix 27
27
B
804 807Right-handed alpha
Helix 28
28
B
825 833Right-handed alpha
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There are 4 sheets in PDB entry 1XYZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 594first strand
Strand 2
A
555 558parallel
Strand 3
A
528 533parallel
Strand 4
A
789 794parallel
Strand 5
A
749 752parallel
Strand 6
A
717 720parallel
Strand 7
A
683 688parallel
Strand 8
A
639 644parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
723 725first strand
Strand 2
A
756 758parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
592 594first strand
Strand 2
B
555 558parallel
Strand 3
B
528 533parallel
Strand 4
B
789 794parallel
Strand 5
B
749 752parallel
Strand 6
B
717 720parallel
Strand 7
B
683 688parallel
Strand 8
B
639 644parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
723 725first strand
Strand 2
B
756 758parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il