Analysis of interatomic Contacts of Structural Units in PDB entry:
1XZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1XZZ entry

There is 1 chain in PDB entry 1XZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 7HIS 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 5 helices in PDB entry 1XZZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
41 44Right-handed 310
Helix 2
2
A
52 56Right-handed 310
Helix 3
3
A
66 75Right-handed alpha
Helix 4
4
A
85 110Right-handed alpha
Helix 5
5
A
156 159Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 1XZZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
193 199first strand
Strand 2
A
207 211anti-parallel
Strand 3
A
37 39anti-parallel
Strand 4
A
25 29anti-parallel
Strand 5
A
14 20anti-parallel
Strand 6
A
217 224anti-parallel
Strand 7
A
181 186anti-parallel
Strand 8
A
161 165anti-parallel
Strand 9
A
120 125anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
58 61first strand
Strand 2
A
14 20anti-parallel
Strand 3
A
58 61anti-parallel
Strand 4
A
120 125anti-parallel
Strand 5
A
130 139anti-parallel
Strand 6
A
147 152anti-parallel
Strand 7
A
207 211anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il