Analysis of interatomic Contacts of Structural Units in PDB entry:
1Y36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Y36 entry

There is 1 chain in PDB entry 1Y36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 39LYS 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1Y36. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 79Right-handed alpha
Helix 2
2
A
84 114Right-handed alpha
Helix 3
3
A
119 154Right-handed alpha
Helix 4
4
A
167 184Right-handed alpha
Helix 5
5
A
184 189Right-handed alpha
Helix 6
6
A
213 226Right-handed alpha
Helix 7
7
A
226 240Right-handed alpha
Helix 8
8
A
255 286Right-handed alpha
Helix 9
9
A
302 314Right-handed alpha
Helix 10
10
A
315 328Right-handed alpha
Helix 11
11
A
328 340Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1Y36.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 195first strand
Strand 2
A
202 204anti-parallel
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