Analysis of interatomic Contacts of Structural Units in PDB entry:
1YR7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1YR7 entry

There is 1 chain in PDB entry 1YR7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 500CYS 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1YR7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 25Right-handed alpha
Helix 2
2
A
51 53Right-handed 310
Helix 3
3
A
55 61Right-handed alpha
Helix 4
4
A
65 78Right-handed alpha
Helix 5
5
A
80 95Right-handed alpha
Helix 6
6
A
105 112Right-handed alpha
Helix 7
7
A
112 121Right-handed alpha
Helix 8
8
A
132 136Right-handed 310
Helix 9
9
A
138 157Right-handed alpha
Helix 10
10
A
166 170Right-handed 310
Helix 11
11
A
171 183Right-handed alpha
Helix 12
12
A
184 194Right-handed alpha
Helix 13
13
A
197 208Right-handed alpha
Helix 14
14
A
229 242Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1YR7.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
30 34parallel
Strand 3
A
97 101parallel
Strand 4
A
2 7parallel
Strand 5
A
126 131parallel
Strand 6
A
160 164parallel
Strand 7
A
220 221parallel
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