Analysis of interatomic Contacts of Structural Units in PDB entry:
1YUL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1YUL entry

There is 1 chain in PDB entry 1YUL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ARG 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1YUL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 30Right-handed alpha
Helix 2
2
A
43 47Right-handed 310
Helix 3
3
A
52 65Right-handed alpha
Helix 4
4
A
84 94Right-handed alpha
Helix 5
5
A
108 112Right-handed alpha
Helix 6
6
A
113 117Right-handed 310
Helix 7
7
A
119 126Right-handed 310
Helix 8
8
A
142 144Right-handed 310
Helix 9
9
A
145 153Right-handed alpha
Helix 10
10
A
156 160Right-handed 310
Helix 11
11
A
178 188Right-handed alpha
Helix 12
12
A
197 207Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1YUL.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
34 39parallel
Strand 3
A
4 10parallel
Strand 4
A
101 107parallel
Strand 5
A
128 133parallel
Strand 6
A
167 171parallel
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