Analysis of interatomic Contacts of Structural Units in PDB entry:
1YVE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1YVE entry

There are 4 chains in PDB entry 1YVE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
I
 ALA 83ALA 595
J
 PHE 86ALA 595
K
 PHE 86ALA 595
L
 ALA 83ALA 595
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are106 helices in PDB entry 1YVE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
I
112 121Right-handed 310
Helix 2
2
I
136 151Right-handed alpha
Helix 3
3
I
168 173Right-handed alpha
Helix 4
4
I
178 180Right-handed 310
Helix 5
5
I
186 191Right-handed alpha
Helix 6
6
I
202 215Right-handed alpha
Helix 7
7
I
228 236Right-handed alpha
Helix 8
8
I
255 267Right-handed alpha
Helix 9
9
I
287 298Right-handed alpha
Helix 10
10
I
308 320Right-handed alpha
Helix 11
11
I
325 340Right-handed alpha
Helix 12
12
I
345 350Right-handed alpha
Helix 13
13
I
353 357Right-handed alpha
Helix 14
14
I
359 366Right-handed alpha
Helix 15
15
I
369 375Right-handed alpha
Helix 16
16
I
378 408Right-handed alpha
Helix 17
17
I
410 422Right-handed alpha
Helix 18
18
I
440 451Right-handed alpha
Helix 19
19
I
462 481Right-handed alpha
Helix 20
20
I
486 493Right-handed alpha
Helix 21
21
I
495 499Right-handed alpha
Helix 22
22
I
502 508Right-handed alpha
Helix 23
23
I
510 516Right-handed alpha
Helix 24
24
I
519 538Right-handed alpha
Helix 25
25
I
540 546Right-handed alpha
Helix 26
26
I
552 560Right-handed alpha
Helix 27
27
I
563 573Right-handed alpha
Helix 28
28
I
590 592Right-handed 310
Helix 29
29
J
112 121Right-handed 310
Helix 30
30
J
136 150Right-handed alpha
Helix 31
31
J
167 173Right-handed alpha
Helix 32
32
J
186 191Right-handed alpha
Helix 33
33
J
202 215Right-handed alpha
Helix 34
34
J
228 236Right-handed alpha
Helix 35
35
J
255 265Right-handed alpha
Helix 36
36
J
287 298Right-handed alpha
Helix 37
37
J
308 320Right-handed alpha
Helix 38
38
J
325 340Right-handed alpha
Helix 39
39
J
345 350Right-handed alpha
Helix 40
40
J
353 357Right-handed alpha
Helix 41
41
J
359 366Right-handed alpha
Helix 42
42
J
369 375Right-handed alpha
Helix 43
43
J
378 408Right-handed alpha
Helix 44
44
J
410 422Right-handed alpha
Helix 45
45
J
440 451Right-handed alpha
Helix 46
46
J
462 481Right-handed alpha
Helix 47
47
J
486 493Right-handed alpha
Helix 48
48
J
495 499Right-handed alpha
Helix 49
49
J
502 516Right-handed alpha
Helix 50
50
J
519 538Right-handed alpha
Helix 51
51
J
540 545Right-handed alpha
Helix 52
52
J
552 560Right-handed alpha
Helix 53
53
J
563 573Right-handed alpha
Helix 54
54
J
590 592Right-handed 310
Helix 55
55
K
112 121Right-handed 310
Helix 56
56
K
136 150Right-handed alpha
Helix 57
57
K
167 173Right-handed alpha
Helix 58
58
K
186 191Right-handed alpha
Helix 59
59
K
202 215Right-handed alpha
Helix 60
60
K
228 236Right-handed alpha
Helix 61
61
K
255 264Right-handed alpha
Helix 62
62
K
287 298Right-handed alpha
Helix 63
63
K
308 320Right-handed alpha
Helix 64
64
K
325 340Right-handed alpha
Helix 65
65
K
345 350Right-handed alpha
Helix 66
66
K
353 357Right-handed alpha
Helix 67
67
K
359 366Right-handed alpha
Helix 68
68
K
369 374Right-handed alpha
Helix 69
69
K
378 408Right-handed alpha
Helix 70
70
K
410 422Right-handed alpha
Helix 71
71
K
440 451Right-handed alpha
Helix 72
72
K
462 481Right-handed alpha
Helix 73
73
K
486 493Right-handed alpha
Helix 74
74
K
495 499Right-handed alpha
Helix 75
75
K
502 508Right-handed alpha
Helix 76
76
K
510 516Right-handed alpha
Helix 77
77
K
519 538Right-handed alpha
Helix 78
78
K
540 545Right-handed alpha
Helix 79
79
K
552 560Right-handed alpha
Helix 80
80
K
563 573Right-handed alpha
Helix 81
81
K
590 592Right-handed 310
Helix 82
82
L
112 121Right-handed 310
Helix 83
83
L
136 150Right-handed alpha
Helix 84
84
L
167 174Right-handed alpha
Helix 85
85
L
186 191Right-handed alpha
Helix 86
86
L
202 215Right-handed alpha
Helix 87
87
L
228 236Right-handed alpha
Helix 88
88
L
255 267Right-handed alpha
Helix 89
89
L
287 298Right-handed alpha
Helix 90
90
L
308 320Right-handed alpha
Helix 91
91
L
325 340Right-handed alpha
Helix 92
92
L
345 350Right-handed alpha
Helix 93
93
L
353 357Right-handed alpha
Helix 94
94
L
359 375Right-handed alpha
Helix 95
95
L
378 408Right-handed alpha
Helix 96
96
L
410 422Right-handed alpha
Helix 97
97
L
440 451Right-handed alpha
Helix 98
98
L
462 481Right-handed alpha
Helix 99
99
L
486 493Right-handed alpha
Helix 100
100
L
495 499Right-handed alpha
Helix 101
101
L
502 516Right-handed alpha
Helix 102
102
L
519 538Right-handed alpha
Helix 103
103
L
540 545Right-handed alpha
Helix 104
104
L
552 559Right-handed alpha
Helix 105
105
L
563 573Right-handed alpha
Helix 106
106
L
590 592Right-handed 310
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There are 4 sheets in PDB entry 1YVE. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
96 100first strand
Strand 2
I
103 109anti-parallel
Strand 3
I
302 305anti-parallel
Strand 4
I
275 281parallel
Strand 5
I
245 251anti-parallel
Strand 6
I
221 224parallel
Strand 7
I
195 198parallel
Strand 8
I
127 131parallel
Strand 9
I
156 161parallel
Strand 10
I
183 185parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
96 100first strand
Strand 2
J
103 109anti-parallel
Strand 3
J
302 305anti-parallel
Strand 4
J
275 281parallel
Strand 5
J
245 251anti-parallel
Strand 6
J
221 224parallel
Strand 7
J
195 198parallel
Strand 8
J
127 131parallel
Strand 9
J
156 161parallel
Strand 10
J
183 185parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
96 100first strand
Strand 2
K
103 109anti-parallel
Strand 3
K
302 305anti-parallel
Strand 4
K
275 281parallel
Strand 5
K
245 251anti-parallel
Strand 6
K
221 224parallel
Strand 7
K
195 198parallel
Strand 8
K
127 131parallel
Strand 9
K
156 161parallel
Strand 10
K
183 185parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
96 100first strand
Strand 2
L
103 109anti-parallel
Strand 3
L
302 305anti-parallel
Strand 4
L
275 281parallel
Strand 5
L
245 251anti-parallel
Strand 6
L
221 224parallel
Strand 7
L
195 198parallel
Strand 8
L
127 131parallel
Strand 9
L
156 161parallel
Strand 10
L
183 185parallel
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