Analysis of interatomic Contacts of Structural Units in PDB entry:
1YW0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1YW0 entry

There are 4 chains in PDB entry 1YW0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 23VAL 284
B
 THR 23VAL 284
C
 THR 23VAL 284
D
 THR 23VAL 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 1YW0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 28Right-handed alpha
Helix 2
2
A
29 34Right-handed alpha
Helix 3
3
A
47 78Right-handed alpha
Helix 4
4
A
80 101Right-handed alpha
Helix 5
5
A
101 106Right-handed alpha
Helix 6
6
A
109 118Right-handed alpha
Helix 7
7
A
128 138Right-handed alpha
Helix 8
8
A
144 150Right-handed 310
Helix 9
9
A
152 165Right-handed alpha
Helix 10
10
A
167 178Right-handed alpha
Helix 11
11
A
184 189Right-handed 310
Helix 12
12
A
199 201Right-handed 310
Helix 13
13
A
202 212Right-handed alpha
Helix 14
14
A
216 248Right-handed alpha
Helix 15
15
A
272 278Right-handed alpha
Helix 16
16
A
279 281Right-handed 310
Helix 17
17
B
23 29Right-handed alpha
Helix 18
18
B
29 34Right-handed alpha
Helix 19
19
B
47 78Right-handed alpha
Helix 20
20
B
80 101Right-handed alpha
Helix 21
21
B
101 106Right-handed alpha
Helix 22
22
B
109 115Right-handed alpha
Helix 23
23
B
128 139Right-handed alpha
Helix 24
24
B
142 150Right-handed 310
Helix 25
25
B
152 164Right-handed alpha
Helix 26
26
B
167 179Right-handed alpha
Helix 27
27
B
184 189Right-handed 310
Helix 28
28
B
202 211Right-handed alpha
Helix 29
29
B
216 248Right-handed alpha
Helix 30
30
B
272 278Right-handed alpha
Helix 31
31
B
279 281Right-handed 310
Helix 32
32
C
23 28Right-handed alpha
Helix 33
33
C
29 34Right-handed alpha
Helix 34
34
C
47 78Right-handed alpha
Helix 35
35
C
80 101Right-handed alpha
Helix 36
36
C
101 106Right-handed alpha
Helix 37
37
C
109 118Right-handed alpha
Helix 38
38
C
128 138Right-handed alpha
Helix 39
39
C
142 147Right-handed 310
Helix 40
40
C
152 165Right-handed alpha
Helix 41
41
C
167 178Right-handed alpha
Helix 42
42
C
184 188Right-handed 310
Helix 43
43
C
199 201Right-handed 310
Helix 44
44
C
202 212Right-handed alpha
Helix 45
45
C
216 248Right-handed alpha
Helix 46
46
C
272 278Right-handed alpha
Helix 47
47
C
279 281Right-handed 310
Helix 48
48
D
23 28Right-handed alpha
Helix 49
49
D
29 34Right-handed alpha
Helix 50
50
D
47 78Right-handed alpha
Helix 51
51
D
80 101Right-handed alpha
Helix 52
52
D
101 106Right-handed alpha
Helix 53
53
D
109 115Right-handed alpha
Helix 54
54
D
128 138Right-handed alpha
Helix 55
55
D
142 146Right-handed 310
Helix 56
56
D
152 164Right-handed alpha
Helix 57
57
D
167 179Right-handed alpha
Helix 58
58
D
184 189Right-handed 310
Helix 59
59
D
199 201Right-handed 310
Helix 60
60
D
202 212Right-handed alpha
Helix 61
61
D
216 248Right-handed alpha
Helix 62
62
D
272 278Right-handed alpha
Helix 63
63
D
279 281Right-handed 310
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There are no sheets in PDB entry 1YW0
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