Analysis of interatomic Contacts of Structural Units in PDB entry:
1YZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1YZV entry

There is 1 chain in PDB entry 1YZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ILE 196
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1YZV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 26Right-handed alpha
Helix 2
2
A
30 49Right-handed alpha
Helix 3
3
A
61 66Right-handed alpha
Helix 4
4
A
93 98Right-handed alpha
Helix 5
5
A
114 126Right-handed alpha
Helix 6
6
A
141 154Right-handed alpha
Helix 7
7
A
155 158Right-handed 310
Helix 8
8
A
164 174Right-handed alpha
Helix 9
9
A
180 190Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1YZV.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 83first strand
Strand 2
A
53 60parallel
Strand 3
A
12 18parallel
Strand 4
A
102 110parallel
Strand 5
A
129 138parallel
Strand 6
A
160 163parallel
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