Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z0C entry

There is 1 chain in PDB entry 1Z0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 416LEU 618
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1Z0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
466 486Right-handed alpha
Helix 2
2
A
488 490Right-handed 310
Helix 3
3
A
511 524Right-handed alpha
Helix 4
4
A
548 559Right-handed alpha
Helix 5
5
A
569 574Right-handed 310
Helix 6
6
A
591 600Right-handed alpha
Helix 7
7
A
603 613Right-handed alpha
Helix 8
8
A
613 618Right-handed alpha
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There are 4 sheets in PDB entry 1Z0C. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 425first strand
Strand 2
A
527 528anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
460 461first strand
Strand 2
A
492 498parallel
Strand 3
A
439 451anti-parallel
Strand 4
A
428 435anti-parallel
Strand 5
A
505 506anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
460 461first strand
Strand 2
A
492 498parallel
Strand 3
A
439 451anti-parallel
Strand 4
A
428 435anti-parallel
Strand 5
A
531 533parallel
Strand 6
A
563 567parallel
Strand 7
A
585 589parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 537first strand
Strand 2
A
543 544anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il