Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z0L entry

There are 4 chains in PDB entry 1Z0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 183
B
 MET 1PRO 183
C
 T 21 T 40
D
 A 1 T 20
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 1Z0L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 11Right-handed alpha
Helix 2
2
A
11 20Right-handed alpha
Helix 3
3
A
22 31Right-handed alpha
Helix 4
4
A
33 42Right-handed alpha
Helix 5
5
A
48 60Right-handed alpha
Helix 6
6
A
67 78Right-handed alpha
Helix 7
7
A
84 90Right-handed alpha
Helix 8
8
A
100 115Right-handed alpha
Helix 9
9
B
1 11Right-handed alpha
Helix 10
10
B
11 20Right-handed alpha
Helix 11
11
B
22 31Right-handed alpha
Helix 12
12
B
33 42Right-handed alpha
Helix 13
13
B
48 60Right-handed alpha
Helix 14
14
B
67 78Right-handed alpha
Helix 15
15
B
82 90Right-handed alpha
Helix 16
16
B
100 115Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1Z0L.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 96first strand
Strand 2
A
120 124parallel
Strand 3
A
139 144anti-parallel
Strand 4
A
177 181anti-parallel
Strand 5
B
177 181anti-parallel
Strand 6
B
139 144anti-parallel
Strand 7
B
120 124anti-parallel
Strand 8
B
94 96parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il