Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z0T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1Z0T entry

There are 6 chains in PDB entry 1Z0T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 417	LYS 614
B	LYS 417	GLU 615
C	LYS 417	GLU 615
D	LYS 417	GLU 615
E	LYS 417	LYS 614
F	LYS 417	GLU 615

There are 46 helices in PDB entry 1Z0T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	466	486	Right-handed alpha
Helix 2	2	A	511	524	Right-handed alpha
Helix 3	3	A	548	559	Right-handed alpha
Helix 4	4	A	569	571	Right-handed 310
Helix 5	5	A	577	582	Right-handed alpha
Helix 6	6	A	591	600	Right-handed alpha
Helix 7	7	A	603	611	Right-handed alpha
Helix 8	8	B	466	486	Right-handed alpha
Helix 9	9	B	511	524	Right-handed alpha
Helix 10	10	B	548	559	Right-handed alpha
Helix 11	11	B	569	571	Right-handed 310
Helix 12	12	B	577	581	Right-handed 310
Helix 13	13	B	591	600	Right-handed alpha
Helix 14	14	B	603	612	Right-handed alpha
Helix 15	15	C	466	485	Right-handed alpha
Helix 16	16	C	488	490	Right-handed 310
Helix 17	17	C	511	524	Right-handed alpha
Helix 18	18	C	548	560	Right-handed alpha
Helix 19	19	C	569	574	Right-handed 310
Helix 20	20	C	578	583	Right-handed 310
Helix 21	21	C	591	600	Right-handed alpha
Helix 22	22	C	603	611	Right-handed alpha
Helix 23	23	D	466	485	Right-handed alpha
Helix 24	24	D	488	490	Right-handed 310
Helix 25	25	D	511	524	Right-handed alpha
Helix 26	26	D	548	560	Right-handed alpha
Helix 27	27	D	569	571	Right-handed 310
Helix 28	28	D	577	584	Right-handed alpha
Helix 29	29	D	591	600	Right-handed alpha
Helix 30	30	D	603	611	Right-handed alpha
Helix 31	31	D	612	614	Right-handed 310
Helix 32	32	E	466	484	Right-handed alpha
Helix 33	33	E	511	523	Right-handed alpha
Helix 34	34	E	548	558	Right-handed alpha
Helix 35	35	E	569	574	Right-handed 310
Helix 36	36	E	591	598	Right-handed alpha
Helix 37	37	E	603	612	Right-handed alpha
Helix 38	38	F	463	465	Right-handed 310
Helix 39	39	F	466	485	Right-handed alpha
Helix 40	40	F	488	490	Right-handed 310
Helix 41	41	F	511	524	Right-handed alpha
Helix 42	42	F	548	560	Right-handed alpha
Helix 43	43	F	569	574	Right-handed 310
Helix 44	44	F	579	583	Right-handed 310
Helix 45	45	F	591	600	Right-handed alpha
Helix 46	46	F	603	612	Right-handed alpha

There are 21 sheets in PDB entry 1Z0T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	424	425	first strand
Strand 2	A	527	528	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	460	461	first strand
Strand 2	A	492	498	parallel
Strand 3	A	438	451	anti-parallel
Strand 4	A	428	435	anti-parallel
Strand 5	A	505	506	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	531	533	first strand
Strand 2	A	563	567	parallel
Strand 3	A	585	589	parallel

Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	536	537	first strand
Strand 2	A	543	544	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	424	425	first strand
Strand 2	B	527	528	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	459	461	first strand
Strand 2	B	492	498	parallel
Strand 3	B	441	451	anti-parallel
Strand 4	B	428	433	anti-parallel
Strand 5	B	531	533	parallel
Strand 6	B	563	567	parallel
Strand 7	B	585	589	parallel

Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	536	537	first strand
Strand 2	B	543	544	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	424	426	first strand
Strand 2	C	526	528	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	459	461	first strand
Strand 2	C	492	498	parallel
Strand 3	C	439	451	anti-parallel
Strand 4	C	428	435	anti-parallel
Strand 5	C	505	506	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	531	533	first strand
Strand 2	C	563	567	parallel
Strand 3	C	585	589	parallel

Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	536	537	first strand
Strand 2	C	543	544	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	424	426	first strand
Strand 2	D	526	528	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	428	434	first strand
Strand 2	D	440	451	anti-parallel
Strand 3	D	492	498	anti-parallel
Strand 4	D	460	461	parallel

Back to list of sheets
Back to top of page

There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	531	533	first strand
Strand 2	D	563	567	parallel
Strand 3	D	585	589	parallel

Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	536	537	first strand
Strand 2	D	543	544	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	460	461	first strand
Strand 2	E	492	498	parallel
Strand 3	E	440	451	anti-parallel
Strand 4	E	428	434	anti-parallel
Strand 5	E	531	533	parallel
Strand 6	E	563	567	parallel
Strand 7	E	585	589	parallel

Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	536	537	first strand
Strand 2	E	543	544	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	424	425	first strand
Strand 2	F	527	528	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	460	461	first strand
Strand 2	F	492	498	parallel
Strand 3	F	439	451	anti-parallel
Strand 4	F	428	435	anti-parallel
Strand 5	F	505	506	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	531	533	first strand
Strand 2	F	563	567	parallel
Strand 3	F	585	589	parallel

Back to list of sheets
Back to top of page

There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	536	537	first strand
Strand 2	F	543	544	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1Z0T

Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z0T