Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z0U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z0U entry

There are 2 chains in PDB entry 1Z0U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 249
B
 MET 1GLY 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1Z0U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 23Right-handed alpha
Helix 2
2
A
34 40Right-handed 310
Helix 3
3
A
48 57Right-handed alpha
Helix 4
4
A
83 95Right-handed alpha
Helix 5
5
A
153 156Right-handed 310
Helix 6
6
A
157 162Right-handed alpha
Helix 7
7
A
236 247Right-handed alpha
Helix 8
8
B
12 23Right-handed alpha
Helix 9
9
B
34 40Right-handed 310
Helix 10
10
B
48 57Right-handed alpha
Helix 11
11
B
83 95Right-handed alpha
Helix 12
12
B
153 156Right-handed 310
Helix 13
13
B
157 162Right-handed alpha
Helix 14
14
B
236 247Right-handed alpha
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There are 8 sheets in PDB entry 1Z0U. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
2 7parallel
Strand 3
A
42 47parallel
Strand 4
A
65 69parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
229 232anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 113first strand
Strand 2
A
103 105anti-parallel
Strand 3
A
212 224anti-parallel
Strand 4
A
197 208anti-parallel
Strand 5
A
128 134anti-parallel
Strand 6
A
137 144anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 113first strand
Strand 2
A
103 105anti-parallel
Strand 3
A
212 224anti-parallel
Strand 4
A
197 208anti-parallel
Strand 5
A
116 121anti-parallel
Strand 6
A
146 151anti-parallel
Strand 7
A
174 179anti-parallel
Strand 8
A
189 191anti-parallel
Strand 9
B
166 167parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
B
189 191parallel
Strand 3
B
174 179anti-parallel
Strand 4
B
146 151anti-parallel
Strand 5
B
116 121anti-parallel
Strand 6
B
197 208anti-parallel
Strand 7
B
212 224anti-parallel
Strand 8
B
103 105anti-parallel
Strand 9
B
112 113anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 167first strand
Strand 2
B
189 191parallel
Strand 3
B
174 179anti-parallel
Strand 4
B
146 151anti-parallel
Strand 5
B
116 121anti-parallel
Strand 6
B
197 208anti-parallel
Strand 7
B
128 134anti-parallel
Strand 8
B
137 144anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 30first strand
Strand 2
B
2 7parallel
Strand 3
B
42 47parallel
Strand 4
B
65 69parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
229 232anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il