Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z0V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1Z0V entry

There are 6 chains in PDB entry 1Z0V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 417	LYS 614
B	LYS 417	LYS 614
C	LEU 418	LYS 614
D	LYS 417	LYS 614
E	LYS 417	LYS 614
F	LYS 417	LYS 614

There are 44 helices in PDB entry 1Z0V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	466	476	Right-handed alpha
Helix 2	2	A	477	486	Right-handed alpha
Helix 3	3	A	488	490	Right-handed 310
Helix 4	4	A	511	524	Right-handed alpha
Helix 5	5	A	548	560	Right-handed alpha
Helix 6	6	A	569	571	Right-handed 310
Helix 7	7	A	592	600	Right-handed alpha
Helix 8	8	A	603	611	Right-handed alpha
Helix 9	9	B	466	484	Right-handed alpha
Helix 10	10	B	488	490	Right-handed 310
Helix 11	11	B	511	524	Right-handed alpha
Helix 12	12	B	548	559	Right-handed alpha
Helix 13	13	B	569	574	Right-handed 310
Helix 14	14	B	592	598	Right-handed alpha
Helix 15	15	B	603	614	Right-handed alpha
Helix 16	16	C	463	465	Right-handed 310
Helix 17	17	C	466	476	Right-handed alpha
Helix 18	18	C	477	483	Right-handed alpha
Helix 19	19	C	488	490	Right-handed 310
Helix 20	20	C	511	524	Right-handed alpha
Helix 21	21	C	548	560	Right-handed alpha
Helix 22	22	C	569	574	Right-handed 310
Helix 23	23	C	591	600	Right-handed alpha
Helix 24	24	C	603	613	Right-handed alpha
Helix 25	25	D	466	486	Right-handed alpha
Helix 26	26	D	488	490	Right-handed 310
Helix 27	27	D	511	524	Right-handed alpha
Helix 28	28	D	548	560	Right-handed alpha
Helix 29	29	D	569	574	Right-handed 310
Helix 30	30	D	591	600	Right-handed alpha
Helix 31	31	D	603	613	Right-handed alpha
Helix 32	32	E	463	465	Right-handed 310
Helix 33	33	E	466	485	Right-handed alpha
Helix 34	34	E	511	524	Right-handed alpha
Helix 35	35	E	548	559	Right-handed alpha
Helix 36	36	E	570	574	Right-handed 310
Helix 37	37	E	591	598	Right-handed alpha
Helix 38	38	E	603	613	Right-handed alpha
Helix 39	39	F	466	484	Right-handed alpha
Helix 40	40	F	511	524	Right-handed alpha
Helix 41	41	F	548	559	Right-handed alpha
Helix 42	42	F	569	571	Right-handed 310
Helix 43	43	F	591	600	Right-handed alpha
Helix 44	44	F	603	613	Right-handed alpha

There are 19 sheets in PDB entry 1Z0V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	460	461	first strand
Strand 2	A	492	498	parallel
Strand 3	A	440	451	anti-parallel
Strand 4	A	428	435	anti-parallel
Strand 5	A	505	506	anti-parallel

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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	531	533	first strand
Strand 2	A	563	567	parallel
Strand 3	A	585	589	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	536	537	first strand
Strand 2	A	543	544	anti-parallel

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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	460	461	first strand
Strand 2	B	492	498	parallel
Strand 3	B	442	451	anti-parallel
Strand 4	B	428	432	anti-parallel
Strand 5	B	531	533	parallel
Strand 6	B	563	567	parallel
Strand 7	B	587	589	parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	536	537	first strand
Strand 2	B	543	544	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	424	425	first strand
Strand 2	C	527	528	anti-parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	460	461	first strand
Strand 2	C	492	498	parallel
Strand 3	C	440	451	anti-parallel
Strand 4	C	428	435	anti-parallel
Strand 5	C	505	506	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	531	533	first strand
Strand 2	C	563	567	parallel
Strand 3	C	585	589	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	536	537	first strand
Strand 2	C	543	544	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	424	426	first strand
Strand 2	D	526	528	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	460	461	first strand
Strand 2	D	492	498	parallel
Strand 3	D	440	451	anti-parallel
Strand 4	D	428	435	anti-parallel
Strand 5	D	505	506	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	531	533	first strand
Strand 2	D	563	567	parallel
Strand 3	D	585	589	parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	536	537	first strand
Strand 2	D	543	544	anti-parallel

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There are 7 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	460	461	first strand
Strand 2	E	492	498	parallel
Strand 3	E	441	451	anti-parallel
Strand 4	E	428	433	anti-parallel
Strand 5	E	531	533	parallel
Strand 6	E	563	567	parallel
Strand 7	E	585	589	parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	536	537	first strand
Strand 2	E	543	544	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	424	425	first strand
Strand 2	F	527	528	anti-parallel

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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	460	461	first strand
Strand 2	F	492	498	parallel
Strand 3	F	439	451	anti-parallel
Strand 4	F	428	435	anti-parallel
Strand 5	F	505	506	anti-parallel

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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	531	533	first strand
Strand 2	F	563	567	parallel
Strand 3	F	585	589	parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	536	537	first strand
Strand 2	F	543	544	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1Z0V

Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z0V