Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z24 entry

There is 1 chain in PDB entry 1Z24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1HIS 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1Z24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 23Right-handed alpha
Helix 2
2
A
36 38Right-handed alpha
Helix 3
3
A
80 83Right-handed alpha
Helix 4
4
A
144 156Right-handed alpha
Helix 5
5
A
162 164Right-handed alpha
Helix 6
6
A
172 175Right-handed alpha
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There are 3 sheets in PDB entry 1Z24. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 108first strand
Strand 2
A
113 121anti-parallel
Strand 3
A
127 136anti-parallel
Strand 4
A
25 32anti-parallel
Strand 5
A
42 50anti-parallel
Strand 6
A
55 63anti-parallel
Strand 7
A
66 76anti-parallel
Strand 8
A
88 94anti-parallel
Strand 9
A
97 101anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
127 136anti-parallel
Strand 3
A
25 32anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 32first strand
Strand 2
A
42 50anti-parallel
Strand 3
A
55 63anti-parallel
Strand 4
A
66 76anti-parallel
Strand 5
A
179 182parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il