Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z3V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z3V entry

There is 1 chain in PDB entry 1Z3V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 2SER 431
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1Z3V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 39Right-handed 310
Helix 2
2
A
63 70Right-handed alpha
Helix 3
3
A
77 83Right-handed alpha
Helix 4
4
A
160 165Right-handed 310
Helix 5
5
A
234 239Right-handed 310
Helix 6
6
A
323 335Right-handed alpha
Helix 7
7
A
338 343Right-handed alpha
Helix 8
8
A
344 356Right-handed alpha
Helix 9
9
A
371 376Right-handed alpha
Helix 10
10
A
400 408Right-handed alpha
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There are 11 sheets in PDB entry 1Z3V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
71 73parallel
Strand 3
A
41 43anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
16 20anti-parallel
Strand 3
A
412 422parallel
Strand 4
A
90 94anti-parallel
Strand 5
A
84 86anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
16 20anti-parallel
Strand 3
A
412 422parallel
Strand 4
A
122 129anti-parallel
Strand 5
A
275 283anti-parallel
Strand 6
A
292 301anti-parallel
Strand 7
A
304 307anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 34first strand
Strand 2
A
103 110anti-parallel
Strand 3
A
357 364anti-parallel
Strand 4
A
116 117anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 114first strand
Strand 2
A
103 110anti-parallel
Strand 3
A
357 364anti-parallel
Strand 4
A
138 144anti-parallel
Strand 5
A
207 214anti-parallel
Strand 6
A
217 223anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
55 56anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
100 101anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 180first strand
Strand 2
A
183 184anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 191first strand
Strand 2
A
197 198anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 204first strand
Strand 2
A
231 233anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 264first strand
Strand 2
A
269 270parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il