Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z47 entry

There are 2 chains in PDB entry 1Z47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 11ARG 355
B
 THR 14ARG 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1Z47. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 63Right-handed alpha
Helix 2
2
A
83 87Right-handed 310
Helix 3
3
A
93 97Right-handed 310
Helix 4
4
A
103 115Right-handed alpha
Helix 5
5
A
118 133Right-handed alpha
Helix 6
6
A
135 139Right-handed 310
Helix 7
7
A
142 146Right-handed 310
Helix 8
8
A
147 161Right-handed alpha
Helix 9
9
A
177 196Right-handed alpha
Helix 10
10
A
205 213Right-handed alpha
Helix 11
11
A
229 236Right-handed alpha
Helix 12
12
A
239 246Right-handed alpha
Helix 13
13
A
285 287Right-handed 310
Helix 14
14
A
330 334Right-handed 310
Helix 15
15
B
53 63Right-handed alpha
Helix 16
16
B
83 87Right-handed 310
Helix 17
17
B
103 110Right-handed alpha
Helix 18
18
B
111 115Right-handed 310
Helix 19
19
B
118 133Right-handed alpha
Helix 20
20
B
135 139Right-handed 310
Helix 21
21
B
142 146Right-handed 310
Helix 22
22
B
147 161Right-handed alpha
Helix 23
23
B
177 196Right-handed alpha
Helix 24
24
B
205 213Right-handed alpha
Helix 25
25
B
229 236Right-handed alpha
Helix 26
26
B
239 246Right-handed alpha
Helix 27
27
B
285 287Right-handed 310
Helix 28
28
B
332 334Right-handed 310
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There are 10 sheets in PDB entry 1Z47. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 39first strand
Strand 2
A
13 22anti-parallel
Strand 3
A
69 74anti-parallel
Strand 4
A
77 78anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 92first strand
Strand 2
A
166 170parallel
Strand 3
A
198 202parallel
Strand 4
A
43 47parallel
Strand 5
A
215 220parallel
Strand 6
A
223 228anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 255first strand
Strand 2
A
279 284anti-parallel
Strand 3
A
351 354anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 263first strand
Strand 2
A
266 269anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 293first strand
Strand 2
A
342 347anti-parallel
Strand 3
A
301 308anti-parallel
Strand 4
A
313 319anti-parallel
Strand 5
A
324 329anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 38first strand
Strand 2
B
15 22anti-parallel
Strand 3
B
69 74anti-parallel
Strand 4
B
77 78anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 93first strand
Strand 2
B
166 170parallel
Strand 3
B
198 203parallel
Strand 4
B
43 47parallel
Strand 5
B
215 220parallel
Strand 6
B
223 228anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
250 255first strand
Strand 2
B
279 284anti-parallel
Strand 3
B
351 354anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
260 262first strand
Strand 2
B
267 269anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
289 293first strand
Strand 2
B
342 347anti-parallel
Strand 3
B
301 308anti-parallel
Strand 4
B
312 319anti-parallel
Strand 5
B
324 330anti-parallel
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