Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z4O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z4O entry

There are 2 chains in PDB entry 1Z4O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLN 220
B
MET 1LYS 219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1Z4O. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
15 31Right-handed alpha
Helix 2
2
A
37 42Right-handed alpha
Helix 3
3
A
48 60Right-handed alpha
Helix 4
4
A
65 84Right-handed alpha
Helix 5
5
A
88 92Right-handed 310
Helix 6
6
A
95 106Right-handed alpha
Helix 7
7
A
118 126Right-handed alpha
Helix 8
8
A
128 132Right-handed 310
Helix 9
9
A
148 158Right-handed alpha
Helix 10
10
A
161 163Right-handed 310
Helix 11
11
A
171 182Right-handed alpha
Helix 12
12
A
190 195Right-handed alpha
Helix 13
13
A
203 207Right-handed 310
Helix 14
14
A
208 220Right-handed alpha
Helix 15
15
B
16 31Right-handed alpha
Helix 16
16
B
39 44Right-handed 310
Helix 17
17
B
48 59Right-handed alpha
Helix 18
18
B
68 84Right-handed alpha
Helix 19
19
B
95 106Right-handed alpha
Helix 20
20
B
118 126Right-handed alpha
Helix 21
21
B
128 132Right-handed 310
Helix 22
22
B
137 141Right-handed 310
Helix 23
23
B
148 158Right-handed alpha
Helix 24
24
B
161 163Right-handed 310
Helix 25
25
B
171 182Right-handed alpha
Helix 26
26
B
190 195Right-handed alpha
Helix 27
27
B
203 207Right-handed 310
Helix 28
28
B
208 219Right-handed alpha
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There are 2 sheets in PDB entry 1Z4O. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
134 135first strand
Strand 2
A
109 112parallel
Strand 3
A
4 7parallel
Strand 4
A
165 169parallel
Strand 5
A
184 188parallel
Strand 6
A
199 201parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
134 135first strand
Strand 2
B
109 112parallel
Strand 3
B
4 7parallel
Strand 4
B
165 169parallel
Strand 5
B
184 188parallel
Strand 6
B
199 201parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il