Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z5X entry

There are 2 chains in PDB entry 1Z5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
U
 VAL 300SER 492
E
 PRO 179VAL 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1Z5X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
U
301 320Right-handed alpha
Helix 2
2
U
323 327Right-handed 310
Helix 3
3
U
328 352Right-handed alpha
Helix 4
4
U
368 370Right-handed 310
Helix 5
5
U
371 376Right-handed alpha
Helix 6
6
U
380 388Right-handed alpha
Helix 7
7
U
388 396Right-handed alpha
Helix 8
8
U
398 411Right-handed alpha
Helix 9
9
U
420 443Right-handed alpha
Helix 10
10
U
448 455Right-handed alpha
Helix 11
11
U
455 466Right-handed alpha
Helix 12
12
U
472 476Right-handed 310
Helix 13
13
U
481 491Right-handed alpha
Helix 14
14
E
184 198Right-handed alpha
Helix 15
15
E
202 211Right-handed alpha
Helix 16
16
E
220 244Right-handed alpha
Helix 17
17
E
247 251Right-handed 310
Helix 18
18
E
252 274Right-handed alpha
Helix 19
19
E
292 299Right-handed alpha
Helix 20
20
E
301 319Right-handed alpha
Helix 21
21
E
321 334Right-handed alpha
Helix 22
22
E
342 363Right-handed alpha
Helix 23
23
E
368 400Right-handed alpha
Helix 24
24
E
405 413Right-handed alpha
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There are 2 sheets in PDB entry 1Z5X. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
359 360first strand
Strand 2
U
366 367anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
276 277first strand
Strand 2
E
282 284anti-parallel
Strand 3
E
290 291anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il