Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z5Z entry

There are 2 chains in PDB entry 1Z5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 663TYR 906
B
 ASP 662VAL 903
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 1Z5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
673 691Right-handed alpha
Helix 2
2
A
695 714Right-handed alpha
Helix 3
3
A
717 722Right-handed alpha
Helix 4
4
A
730 746Right-handed alpha
Helix 5
5
A
756 772Right-handed alpha
Helix 6
6
A
783 797Right-handed alpha
Helix 7
7
A
860 872Right-handed alpha
Helix 8
8
A
872 877Right-handed alpha
Helix 9
9
A
878 883Right-handed 310
Helix 10
10
A
884 889Right-handed alpha
Helix 11
11
A
891 900Right-handed alpha
Helix 12
12
B
673 689Right-handed alpha
Helix 13
13
B
695 714Right-handed alpha
Helix 14
14
B
717 722Right-handed alpha
Helix 15
15
B
726 729Right-handed 310
Helix 16
16
B
730 746Right-handed alpha
Helix 17
17
B
756 772Right-handed alpha
Helix 18
18
B
783 797Right-handed alpha
Helix 19
19
B
860 872Right-handed alpha
Helix 20
20
B
884 890Right-handed alpha
Helix 21
21
B
891 900Right-handed alpha
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There are 2 sheets in PDB entry 1Z5Z. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
664 670first strand
Strand 2
A
851 857parallel
Strand 3
A
821 824parallel
Strand 4
A
750 754parallel
Strand 5
A
802 806parallel
Strand 6
A
777 778parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
663 670first strand
Strand 2
B
850 857parallel
Strand 3
B
821 824parallel
Strand 4
B
750 754parallel
Strand 5
B
802 806parallel
Strand 6
B
777 778parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il