Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z63


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z63 entry

There are 6 chains in PDB entry 1Z63 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 A 7 A 25
D
 T 1 T 20
E
 A 7 A 25
F
 T 1 T 20
A
 PHE 432VAL 903
B
 PHE 432VAL 903
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 1Z63. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
445 461Right-handed alpha
Helix 2
2
A
474 489Right-handed alpha
Helix 3
3
A
503 515Right-handed alpha
Helix 4
4
A
531 535Right-handed 310
Helix 5
5
A
542 546Right-handed alpha
Helix 6
6
A
548 553Right-handed alpha
Helix 7
7
A
564 568Right-handed 310
Helix 8
8
A
572 580Right-handed alpha
Helix 9
9
A
597 609Right-handed alpha
Helix 10
10
A
615 621Right-handed alpha
Helix 11
11
A
623 629Right-handed alpha
Helix 12
12
A
631 643Right-handed alpha
Helix 13
13
A
653 658Right-handed alpha
Helix 14
14
A
673 685Right-handed alpha
Helix 15
15
A
686 690Right-handed 310
Helix 16
16
A
696 714Right-handed alpha
Helix 17
17
A
717 722Right-handed alpha
Helix 18
18
A
730 745Right-handed alpha
Helix 19
19
A
756 772Right-handed alpha
Helix 20
20
A
783 797Right-handed alpha
Helix 21
21
A
835 840Right-handed alpha
Helix 22
22
A
860 865Right-handed alpha
Helix 23
23
A
865 870Right-handed alpha
Helix 24
24
A
878 882Right-handed 310
Helix 25
25
A
884 889Right-handed 310
Helix 26
26
A
891 900Right-handed alpha
Helix 27
27
B
445 461Right-handed alpha
Helix 28
28
B
474 489Right-handed alpha
Helix 29
29
B
503 515Right-handed alpha
Helix 30
30
B
531 535Right-handed 310
Helix 31
31
B
541 546Right-handed alpha
Helix 32
32
B
548 553Right-handed alpha
Helix 33
33
B
564 568Right-handed 310
Helix 34
34
B
572 580Right-handed alpha
Helix 35
35
B
597 609Right-handed alpha
Helix 36
36
B
615 621Right-handed alpha
Helix 37
37
B
623 629Right-handed alpha
Helix 38
38
B
631 643Right-handed alpha
Helix 39
39
B
653 658Right-handed alpha
Helix 40
40
B
673 685Right-handed alpha
Helix 41
41
B
686 690Right-handed 310
Helix 42
42
B
696 714Right-handed alpha
Helix 43
43
B
717 722Right-handed alpha
Helix 44
44
B
730 745Right-handed alpha
Helix 45
45
B
756 772Right-handed alpha
Helix 46
46
B
783 797Right-handed alpha
Helix 47
47
B
835 840Right-handed alpha
Helix 48
48
B
860 865Right-handed alpha
Helix 49
49
B
865 870Right-handed alpha
Helix 50
50
B
878 882Right-handed 310
Helix 51
51
B
884 890Right-handed 310
Helix 52
52
B
891 900Right-handed alpha
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There are 4 sheets in PDB entry 1Z63. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 522first strand
Strand 2
A
537 541parallel
Strand 3
A
495 499parallel
Strand 4
A
556 562parallel
Strand 5
A
583 589parallel
Strand 6
A
465 467parallel
Strand 7
A
646 647parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
663 670first strand
Strand 2
A
850 857parallel
Strand 3
A
821 824parallel
Strand 4
A
750 753parallel
Strand 5
A
804 806parallel
Strand 6
A
777 779parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
520 522first strand
Strand 2
B
537 540parallel
Strand 3
B
495 498parallel
Strand 4
B
556 562parallel
Strand 5
B
583 589parallel
Strand 6
B
465 467parallel
Strand 7
B
646 647parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
663 670first strand
Strand 2
B
850 857parallel
Strand 3
B
821 824parallel
Strand 4
B
750 753parallel
Strand 5
B
804 806parallel
Strand 6
B
777 779parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il