Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z6B entry

There are 6 chains in PDB entry 1Z6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 84SER 229
B
 THR 85ALA 227
C
 SER 86LEU 228
D
 ASP 84ALA 227
E
 ASP 84LEU 228
F
 TYR 83LEU 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1Z6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
88 96Right-handed alpha
Helix 2
2
A
127 132Right-handed 310
Helix 3
3
A
141 161Right-handed alpha
Helix 4
4
B
88 96Right-handed alpha
Helix 5
5
B
127 133Right-handed 310
Helix 6
6
B
141 159Right-handed alpha
Helix 7
7
C
88 96Right-handed alpha
Helix 8
8
C
129 133Right-handed 310
Helix 9
9
C
141 160Right-handed alpha
Helix 10
10
D
88 96Right-handed alpha
Helix 11
11
D
127 133Right-handed 310
Helix 12
12
D
141 159Right-handed alpha
Helix 13
13
E
88 96Right-handed alpha
Helix 14
14
E
127 132Right-handed 310
Helix 15
15
E
141 160Right-handed alpha
Helix 16
16
F
88 96Right-handed alpha
Helix 17
17
F
127 133Right-handed 310
Helix 18
18
F
141 160Right-handed alpha
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There are 3 sheets in PDB entry 1Z6B. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 112first strand
Strand 2
A
116 122anti-parallel
Strand 3
A
188 199anti-parallel
Strand 4
A
204 213anti-parallel
Strand 5
A
216 228anti-parallel
Strand 6
A
169 179anti-parallel
Strand 7
B
171 179anti-parallel
Strand 8
B
216 226anti-parallel
Strand 9
B
205 213anti-parallel
Strand 10
B
188 198anti-parallel
Strand 11
B
116 122anti-parallel
Strand 12
B
107 112anti-parallel
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There are 12 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
107 112first strand
Strand 2
C
116 122anti-parallel
Strand 3
C
188 199anti-parallel
Strand 4
C
204 213anti-parallel
Strand 5
C
216 227anti-parallel
Strand 6
C
170 179anti-parallel
Strand 7
D
170 179anti-parallel
Strand 8
D
216 227anti-parallel
Strand 9
D
206 213anti-parallel
Strand 10
D
188 197anti-parallel
Strand 11
D
116 122anti-parallel
Strand 12
D
107 112anti-parallel
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There are 13 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
107 112first strand
Strand 2
E
116 122anti-parallel
Strand 3
E
188 198anti-parallel
Strand 4
E
204 213anti-parallel
Strand 5
E
216 227anti-parallel
Strand 6
E
170 179anti-parallel
Strand 7
F
170 179anti-parallel
Strand 8
F
216 227anti-parallel
Strand 9
F
204 213anti-parallel
Strand 10
F
188 199anti-parallel
Strand 11
F
116 122anti-parallel
Strand 12
F
107 112anti-parallel
Strand 13
F
84 87anti-parallel
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