Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z6R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z6R entry

There are 4 chains in PDB entry 1Z6R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 12GLY 406
B
 GLN 12GLY 406
C
 GLN 12GLY 406
D
 GLN 12GLY 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 1Z6R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 27Right-handed alpha
Helix 2
2
A
32 40Right-handed alpha
Helix 3
3
A
43 57Right-handed alpha
Helix 4
4
A
123 139Right-handed alpha
Helix 5
5
A
140 143Right-handed 310
Helix 6
6
A
177 187Right-handed alpha
Helix 7
7
A
195 207Right-handed alpha
Helix 8
8
A
244 248Right-handed 310
Helix 9
9
A
265 270Right-handed alpha
Helix 10
10
A
270 283Right-handed alpha
Helix 11
11
A
288 292Right-handed 310
Helix 12
12
A
296 306Right-handed alpha
Helix 13
13
A
308 334Right-handed alpha
Helix 14
14
A
342 346Right-handed 310
Helix 15
15
A
347 363Right-handed alpha
Helix 16
16
A
364 369Right-handed alpha
Helix 17
17
A
385 394Right-handed alpha
Helix 18
18
A
397 404Right-handed alpha
Helix 19
19
B
12 29Right-handed alpha
Helix 20
20
B
32 40Right-handed alpha
Helix 21
21
B
43 57Right-handed alpha
Helix 22
22
B
123 139Right-handed alpha
Helix 23
23
B
140 143Right-handed 310
Helix 24
24
B
177 187Right-handed alpha
Helix 25
25
B
195 206Right-handed alpha
Helix 26
26
B
244 248Right-handed 310
Helix 27
27
B
264 270Right-handed alpha
Helix 28
28
B
270 285Right-handed alpha
Helix 29
29
B
288 292Right-handed 310
Helix 30
30
B
296 306Right-handed alpha
Helix 31
31
B
308 334Right-handed alpha
Helix 32
32
B
342 346Right-handed 310
Helix 33
33
B
347 363Right-handed alpha
Helix 34
34
B
364 369Right-handed alpha
Helix 35
35
B
385 396Right-handed alpha
Helix 36
36
B
397 404Right-handed alpha
Helix 37
37
C
12 28Right-handed alpha
Helix 38
38
C
32 41Right-handed alpha
Helix 39
39
C
43 57Right-handed alpha
Helix 40
40
C
123 139Right-handed alpha
Helix 41
41
C
177 187Right-handed alpha
Helix 42
42
C
195 206Right-handed alpha
Helix 43
43
C
244 248Right-handed 310
Helix 44
44
C
265 270Right-handed alpha
Helix 45
45
C
270 284Right-handed alpha
Helix 46
46
C
288 293Right-handed 310
Helix 47
47
C
296 307Right-handed alpha
Helix 48
48
C
308 334Right-handed alpha
Helix 49
49
C
342 346Right-handed 310
Helix 50
50
C
347 363Right-handed alpha
Helix 51
51
C
364 369Right-handed alpha
Helix 52
52
C
385 396Right-handed alpha
Helix 53
53
C
397 404Right-handed alpha
Helix 54
54
D
12 29Right-handed alpha
Helix 55
55
D
32 40Right-handed alpha
Helix 56
56
D
43 57Right-handed alpha
Helix 57
57
D
123 139Right-handed alpha
Helix 58
58
D
140 143Right-handed 310
Helix 59
59
D
178 187Right-handed alpha
Helix 60
60
D
195 206Right-handed alpha
Helix 61
61
D
244 248Right-handed 310
Helix 62
62
D
264 270Right-handed alpha
Helix 63
63
D
270 285Right-handed alpha
Helix 64
64
D
288 292Right-handed 310
Helix 65
65
D
296 306Right-handed alpha
Helix 66
66
D
308 334Right-handed alpha
Helix 67
67
D
342 346Right-handed 310
Helix 68
68
D
347 363Right-handed alpha
Helix 69
69
D
364 369Right-handed alpha
Helix 70
70
D
385 396Right-handed alpha
Helix 71
71
D
397 404Right-handed alpha
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There are 16 sheets in PDB entry 1Z6R. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
79 80anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 115first strand
Strand 2
A
96 103anti-parallel
Strand 3
A
86 93anti-parallel
Strand 4
A
146 153parallel
Strand 5
A
190 194parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 158first strand
Strand 2
A
163 166anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 234first strand
Strand 2
A
224 230anti-parallel
Strand 3
A
215 220anti-parallel
Strand 4
A
337 341parallel
Strand 5
A
372 375parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
79 80anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 115first strand
Strand 2
B
96 103anti-parallel
Strand 3
B
85 93anti-parallel
Strand 4
B
145 153parallel
Strand 5
B
190 194parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 158first strand
Strand 2
B
163 166anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 234first strand
Strand 2
B
224 230anti-parallel
Strand 3
B
215 220anti-parallel
Strand 4
B
337 341parallel
Strand 5
B
372 375parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 61first strand
Strand 2
C
79 80anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
108 115first strand
Strand 2
C
96 103anti-parallel
Strand 3
C
85 93anti-parallel
Strand 4
C
145 153parallel
Strand 5
C
190 194parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
156 157first strand
Strand 2
C
164 166anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
233 234first strand
Strand 2
C
224 230anti-parallel
Strand 3
C
215 220anti-parallel
Strand 4
C
337 341parallel
Strand 5
C
372 375parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 61first strand
Strand 2
D
79 80anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
108 115first strand
Strand 2
D
96 103anti-parallel
Strand 3
D
85 92anti-parallel
Strand 4
D
145 153parallel
Strand 5
D
190 194parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
157 158first strand
Strand 2
D
163 164anti-parallel
Strand 3
D
176 177anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
233 234first strand
Strand 2
D
224 230anti-parallel
Strand 3
D
215 220anti-parallel
Strand 4
D
337 341parallel
Strand 5
D
372 375parallel
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