Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z7J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z7J entry

There are 2 chains in PDB entry 1Z7J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 10PRO 125
B
 SER 208PRO 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 1Z7J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
74 81Right-handed alpha
Helix 2
2
B
274 281Right-handed alpha
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There are 3 sheets in PDB entry 1Z7J. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
12 18anti-parallel
Strand 3
A
104 112parallel
Strand 4
A
115 123anti-parallel
Strand 5
B
315 323anti-parallel
Strand 6
B
304 312anti-parallel
Strand 7
B
212 218parallel
Strand 8
B
223 224anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
12 18anti-parallel
Strand 3
A
104 112parallel
Strand 4
A
115 123anti-parallel
Strand 5
B
315 323anti-parallel
Strand 6
B
304 312anti-parallel
Strand 7
B
212 218parallel
Strand 8
B
254 255anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 48first strand
Strand 2
A
29 35anti-parallel
Strand 3
A
67 73anti-parallel
Strand 4
A
88 97anti-parallel
Strand 5
B
288 297anti-parallel
Strand 6
B
267 273anti-parallel
Strand 7
B
229 235anti-parallel
Strand 8
B
241 248anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il