Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z8H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z8H entry

There are 4 chains in PDB entry 1Z8H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5ARG 206
B
 THR 7PHE 205
C
 LYS 6PHE 205
D
 LYS 6ARG 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 1Z8H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 21Right-handed alpha
Helix 2
2
A
28 41Right-handed alpha
Helix 3
3
A
56 70Right-handed alpha
Helix 4
4
A
85 90Right-handed alpha
Helix 5
5
A
99 116Right-handed alpha
Helix 6
6
A
135 155Right-handed alpha
Helix 7
7
A
161 166Right-handed alpha
Helix 8
8
A
170 178Right-handed alpha
Helix 9
9
A
184 197Right-handed alpha
Helix 10
10
A
198 203Right-handed alpha
Helix 11
11
B
16 21Right-handed alpha
Helix 12
12
B
28 41Right-handed alpha
Helix 13
13
B
56 73Right-handed alpha
Helix 14
14
B
85 89Right-handed 310
Helix 15
15
B
99 118Right-handed alpha
Helix 16
16
B
135 154Right-handed alpha
Helix 17
17
B
161 166Right-handed alpha
Helix 18
18
B
170 178Right-handed alpha
Helix 19
19
B
184 197Right-handed alpha
Helix 20
20
B
198 203Right-handed alpha
Helix 21
21
C
16 21Right-handed alpha
Helix 22
22
C
28 41Right-handed alpha
Helix 23
23
C
56 73Right-handed alpha
Helix 24
24
C
85 90Right-handed alpha
Helix 25
25
C
99 118Right-handed alpha
Helix 26
26
C
135 155Right-handed alpha
Helix 27
27
C
161 166Right-handed alpha
Helix 28
28
C
169 178Right-handed alpha
Helix 29
29
C
184 197Right-handed alpha
Helix 30
30
C
198 203Right-handed alpha
Helix 31
31
D
16 21Right-handed alpha
Helix 32
32
D
28 41Right-handed alpha
Helix 33
33
D
56 72Right-handed alpha
Helix 34
34
D
86 89Right-handed 310
Helix 35
35
D
99 118Right-handed alpha
Helix 36
36
D
135 155Right-handed alpha
Helix 37
37
D
161 166Right-handed alpha
Helix 38
38
D
170 178Right-handed alpha
Helix 39
39
D
184 197Right-handed alpha
Helix 40
40
D
198 206Right-handed alpha
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There are 8 sheets in PDB entry 1Z8H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 51first strand
Strand 2
A
7 15parallel
Strand 3
A
78 83parallel
Strand 4
A
120 123parallel
Strand 5
A
158 159parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
95 96anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 51first strand
Strand 2
B
10 15parallel
Strand 3
B
78 83parallel
Strand 4
B
120 123parallel
Strand 5
B
158 159parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 92first strand
Strand 2
B
95 96anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 51first strand
Strand 2
C
7 15parallel
Strand 3
C
78 83parallel
Strand 4
C
120 123parallel
Strand 5
C
158 159parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
91 92first strand
Strand 2
C
95 96anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 51first strand
Strand 2
D
10 15parallel
Strand 3
D
78 83parallel
Strand 4
D
120 123parallel
Strand 5
D
158 159parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
91 92first strand
Strand 2
D
95 96anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il