Analysis of interatomic Contacts of Structural Units in PDB entry:
1Z98


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1Z98 entry

There are 2 chains in PDB entry 1Z98 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24SER 274
M
 ALA 24SER 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1Z98. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 32Right-handed 310
Helix 2
2
A
33 64Right-handed alpha
Helix 3
3
A
72 93Right-handed alpha
Helix 4
4
A
101 111Right-handed alpha
Helix 5
5
A
115 141Right-handed alpha
Helix 6
6
A
141 148Right-handed alpha
Helix 7
7
A
160 182Right-handed alpha
Helix 8
8
A
198 218Right-handed alpha
Helix 9
9
A
222 234Right-handed alpha
Helix 10
10
A
235 242Right-handed alpha
Helix 11
11
A
243 263Right-handed alpha
Helix 12
12
M
28 32Right-handed 310
Helix 13
13
M
33 64Right-handed alpha
Helix 14
14
M
72 93Right-handed alpha
Helix 15
15
M
101 111Right-handed alpha
Helix 16
16
M
115 141Right-handed alpha
Helix 17
17
M
141 148Right-handed alpha
Helix 18
18
M
160 182Right-handed alpha
Helix 19
19
M
198 218Right-handed alpha
Helix 20
20
M
222 234Right-handed alpha
Helix 21
21
M
235 242Right-handed alpha
Helix 22
22
M
243 263Right-handed alpha
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There are 2 sheets in PDB entry 1Z98. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 188first strand
Strand 2
A
195 197anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
183 188first strand
Strand 2
M
195 197anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il