Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZBM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZBM entry

There is 1 chain in PDB entry 1ZBM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -2ILE 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1ZBM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 22Right-handed alpha
Helix 2
2
A
37 45Right-handed alpha
Helix 3
3
A
46 48Right-handed 310
Helix 4
4
A
57 61Right-handed alpha
Helix 5
5
A
104 114Right-handed alpha
Helix 6
6
A
123 125Right-handed 310
Helix 7
7
A
126 133Right-handed alpha
Helix 8
8
A
143 153Right-handed 310
Helix 9
9
A
160 166Right-handed alpha
Helix 10
10
A
184 205Right-handed alpha
Helix 11
11
A
205 214Right-handed alpha
Helix 12
12
A
215 217Right-handed 310
Helix 13
13
A
221 233Right-handed alpha
Helix 14
14
A
234 239Right-handed alpha
Helix 15
15
A
241 257Right-handed alpha
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There are 3 sheets in PDB entry 1ZBM. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
2 7parallel
Strand 3
A
52 56parallel
Strand 4
A
172 180anti-parallel
Strand 5
A
67 69anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
2 7parallel
Strand 3
A
52 56parallel
Strand 4
A
172 180anti-parallel
Strand 5
A
75 77anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 121first strand
Strand 2
A
96 99parallel
Strand 3
A
138 141parallel
Strand 4
A
83 86anti-parallel
Strand 5
A
155 159anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il