Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZCJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZCJ entry

There is 1 chain in PDB entry 1ZCJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 261GLY 719
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1ZCJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
261 273Right-handed alpha
Helix 2
2
A
274 279Right-handed 310
Helix 3
3
A
305 317Right-handed alpha
Helix 4
4
A
328 353Right-handed alpha
Helix 5
5
A
367 372Right-handed 310
Helix 6
6
A
384 399Right-handed alpha
Helix 7
7
A
413 419Right-handed alpha
Helix 8
8
A
423 425Right-handed 310
Helix 9
9
A
451 465Right-handed alpha
Helix 10
10
A
479 497Right-handed alpha
Helix 11
11
A
500 512Right-handed alpha
Helix 12
12
A
516 525Right-handed alpha
Helix 13
13
A
525 536Right-handed alpha
Helix 14
14
A
559 567Right-handed alpha
Helix 15
15
A
592 606Right-handed alpha
Helix 16
16
A
614 636Right-handed alpha
Helix 17
17
A
641 653Right-handed alpha
Helix 18
18
A
656 660Right-handed 310
Helix 19
19
A
661 670Right-handed alpha
Helix 20
20
A
670 685Right-handed alpha
Helix 21
21
A
688 692Right-handed 310
Helix 22
22
A
694 703Right-handed alpha
Helix 23
23
A
707 709Right-handed 310
Helix 24
24
A
710 716Right-handed alpha
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There are 3 sheets in PDB entry 1ZCJ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 365first strand
Strand 2
A
321 325parallel
Strand 3
A
298 302parallel
Strand 4
A
376 379parallel
Strand 5
A
404 407parallel
Strand 6
A
427 432parallel
Strand 7
A
441 446anti-parallel
Strand 8
A
468 471parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
551 552first strand
Strand 2
A
555 556anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
579 581first strand
Strand 2
A
589 591anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il