Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZFJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZFJ entry

There is 1 chain in PDB entry 1ZFJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2VAL 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1ZFJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 6Right-handed 310
Helix 2
2
A
15 17Right-handed 310
Helix 3
3
A
29 31Right-handed 310
Helix 4
4
A
59 67Right-handed 310
Helix 5
5
A
80 93Right-handed alpha
Helix 6
6
A
110 119Right-handed alpha
Helix 7
7
A
142 147Right-handed 310
Helix 8
8
A
173 182Right-handed alpha
Helix 9
9
A
203 211Right-handed alpha
Helix 10
10
A
235 245Right-handed alpha
Helix 11
11
A
260 272Right-handed alpha
Helix 12
12
A
286 294Right-handed alpha
Helix 13
13
A
312 315Right-handed alpha
Helix 14
14
A
322 335Right-handed alpha
Helix 15
15
A
349 357Right-handed alpha
Helix 16
16
A
433 451Right-handed alpha
Helix 17
17
A
456 462Right-handed alpha
Helix 18
18
A
470 476Right-handed alpha
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There are 5 sheets in PDB entry 1ZFJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 105first strand
Strand 2
A
124 128parallel
Strand 3
A
136 141anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 168first strand
Strand 2
A
187 191parallel
Strand 3
A
197 202anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 229first strand
Strand 2
A
249 252parallel
Strand 3
A
278 283parallel
Strand 4
A
299 302parallel
Strand 5
A
339 342parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 382first strand
Strand 2
A
385 391anti-parallel
Strand 3
A
424 428anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
42 44anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il