Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZGH entry

There is 1 chain in PDB entry 1ZGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 0GLY 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1ZGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 23Right-handed alpha
Helix 2
2
A
34 38Right-handed 310
Helix 3
3
A
39 47Right-handed alpha
Helix 4
4
A
61 66Right-handed alpha
Helix 5
5
A
85 93Right-handed alpha
Helix 6
6
A
125 140Right-handed alpha
Helix 7
7
A
140 149Right-handed alpha
Helix 8
8
A
166 171Right-handed 310
Helix 9
9
A
177 188Right-handed alpha
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There are 3 sheets in PDB entry 1ZGH. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 32first strand
Strand 2
A
1 6parallel
Strand 3
A
50 53parallel
Strand 4
A
70 74parallel
Strand 5
A
97 104anti-parallel
Strand 6
A
114 121anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 83first strand
Strand 2
A
161 162parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 200first strand
Strand 2
A
203 213anti-parallel
Strand 3
A
216 224anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il