Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZJC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZJC entry

There is 1 chain in PDB entry 1ZJC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3PHE 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 1ZJC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 18Right-handed alpha
Helix 2
2
A
36 50Right-handed alpha
Helix 3
3
A
61 72Right-handed alpha
Helix 4
4
A
73 80Right-handed alpha
Helix 5
5
A
83 96Right-handed alpha
Helix 6
6
A
115 130Right-handed alpha
Helix 7
7
A
130 139Right-handed alpha
Helix 8
8
A
151 159Right-handed alpha
Helix 9
9
A
163 179Right-handed alpha
Helix 10
10
A
185 208Right-handed alpha
Helix 11
11
A
239 241Right-handed 310
Helix 12
12
A
300 309Right-handed alpha
Helix 13
13
A
311 315Right-handed 310
Helix 14
14
A
329 333Right-handed 310
Helix 15
15
A
338 343Right-handed alpha
Helix 16
16
A
355 359Right-handed 310
Helix 17
17
A
361 365Right-handed 310
Helix 18
18
A
366 374Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 1ZJC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 60first strand
Strand 2
A
28 33parallel
Strand 3
A
99 104parallel
Strand 4
A
144 148parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 275first strand
Strand 2
A
278 288anti-parallel
Strand 3
A
291 299anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 275first strand
Strand 2
A
278 288anti-parallel
Strand 3
A
258 268anti-parallel
Strand 4
A
219 225anti-parallel
Strand 5
A
211 216anti-parallel
Strand 6
A
392 396anti-parallel
Strand 7
A
402 407anti-parallel
Strand 8
A
410 411anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 237first strand
Strand 2
A
244 246anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 256first strand
Strand 2
A
317 322anti-parallel
Strand 3
A
348 352anti-parallel
Strand 4
A
381 385anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il