Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZJJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZJJ entry

There are 2 chains in PDB entry 1ZJJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 261
B
 MET 1LEU 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1ZJJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 33Right-handed alpha
Helix 2
2
A
46 56Right-handed alpha
Helix 3
3
A
62 64Right-handed 310
Helix 4
4
A
69 81Right-handed alpha
Helix 5
5
A
91 102Right-handed alpha
Helix 6
6
A
107 113Right-handed alpha
Helix 7
7
A
114 119Right-handed 310
Helix 8
8
A
131 144Right-handed alpha
Helix 9
9
A
166 179Right-handed alpha
Helix 10
10
A
189 200Right-handed alpha
Helix 11
11
A
214 222Right-handed alpha
Helix 12
12
A
235 240Right-handed alpha
Helix 13
13
A
252 261Right-handed 310
Helix 14
14
B
21 32Right-handed alpha
Helix 15
15
B
46 57Right-handed alpha
Helix 16
16
B
62 64Right-handed 310
Helix 17
17
B
69 81Right-handed alpha
Helix 18
18
B
91 102Right-handed alpha
Helix 19
19
B
107 113Right-handed alpha
Helix 20
20
B
114 119Right-handed 310
Helix 21
21
B
131 144Right-handed alpha
Helix 22
22
B
166 179Right-handed alpha
Helix 23
23
B
189 200Right-handed alpha
Helix 24
24
B
214 222Right-handed alpha
Helix 25
25
B
235 241Right-handed alpha
Helix 26
26
B
252 254Right-handed 310
Helix 27
27
B
255 262Right-handed alpha
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There are 8 sheets in PDB entry 1ZJJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 68first strand
Strand 2
A
36 40parallel
Strand 3
A
2 7parallel
Strand 4
A
204 209parallel
Strand 5
A
225 229parallel
Strand 6
A
248 250parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 14first strand
Strand 2
A
17 18anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 89first strand
Strand 2
A
121 124parallel
Strand 3
A
147 150parallel
Strand 4
A
183 184parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 159first strand
Strand 2
A
162 165anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
36 40parallel
Strand 3
B
2 6parallel
Strand 4
B
204 209parallel
Strand 5
B
225 229parallel
Strand 6
B
248 250parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 14first strand
Strand 2
B
17 18anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 89first strand
Strand 2
B
121 124parallel
Strand 3
B
147 150parallel
Strand 4
B
183 184parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 159first strand
Strand 2
B
162 165anti-parallel
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