Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZM1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZM1 entry

There are 2 chains in PDB entry 1ZM1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 4ASP 244
B
 ALA 4PHE 236
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 1ZM1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
125 130Right-handed 310
Helix 2
2
A
145 150Right-handed alpha
Helix 3
3
A
153 157Right-handed 310
Helix 4
4
A
176 180Right-handed 310
Helix 5
5
B
125 130Right-handed 310
Helix 6
6
B
145 150Right-handed alpha
Helix 7
7
B
153 157Right-handed 310
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There are 2 sheets in PDB entry 1ZM1. Click on sheet of interest to get list of strands forming it: A, B,

There are 23 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 123first strand
Strand 2
A
109 114anti-parallel
Strand 3
A
99 105anti-parallel
Strand 4
A
21 28anti-parallel
Strand 5
A
159 171anti-parallel
Strand 6
A
182 188anti-parallel
Strand 7
A
159 171anti-parallel
Strand 8
A
223 230anti-parallel
Strand 9
A
217 220anti-parallel
Strand 10
A
223 230anti-parallel
Strand 11
A
7 14anti-parallel
Strand 12
A
210 212parallel
Strand 13
A
7 14parallel
Strand 14
A
198 200anti-parallel
Strand 15
A
7 14anti-parallel
Strand 16
A
135 142anti-parallel
Strand 17
A
35 42anti-parallel
Strand 18
A
56 62anti-parallel
Strand 19
A
68 77anti-parallel
Strand 20
A
86 89anti-parallel
Strand 21
A
68 77anti-parallel
Strand 22
A
80 83anti-parallel
Strand 23
B
17 18parallel
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There are 22 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 82first strand
Strand 2
B
68 77anti-parallel
Strand 3
B
86 89anti-parallel
Strand 4
B
68 77anti-parallel
Strand 5
B
56 62anti-parallel
Strand 6
B
35 42anti-parallel
Strand 7
B
135 142anti-parallel
Strand 8
B
7 14anti-parallel
Strand 9
B
210 212parallel
Strand 10
B
7 14parallel
Strand 11
B
198 200anti-parallel
Strand 12
B
7 14anti-parallel
Strand 13
B
224 230anti-parallel
Strand 14
B
217 219anti-parallel
Strand 15
B
224 230anti-parallel
Strand 16
B
159 171anti-parallel
Strand 17
B
182 188anti-parallel
Strand 18
B
159 171anti-parallel
Strand 19
B
21 28anti-parallel
Strand 20
B
99 105anti-parallel
Strand 21
B
109 114anti-parallel
Strand 22
B
117 123anti-parallel
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