Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZMW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZMW entry

There are 2 chains in PDB entry 1ZMW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 49TYR 363
B
 PRO 48GLY 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 1ZMW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
87 89Right-handed 310
Helix 2
2
A
90 107Right-handed alpha
Helix 3
3
A
136 145Right-handed alpha
Helix 4
4
A
148 169Right-handed alpha
Helix 5
5
A
177 179Right-handed 310
Helix 6
6
A
212 216Right-handed 310
Helix 7
7
A
217 223Right-handed 310
Helix 8
8
A
228 246Right-handed alpha
Helix 9
9
A
254 265Right-handed alpha
Helix 10
10
A
274 285Right-handed alpha
Helix 11
11
A
288 292Right-handed 310
Helix 12
12
A
294 299Right-handed alpha
Helix 13
13
A
301 306Right-handed alpha
Helix 14
14
A
325 336Right-handed alpha
Helix 15
15
A
338 348Right-handed alpha
Helix 16
16
A
352 361Right-handed alpha
Helix 17
17
B
87 89Right-handed 310
Helix 18
18
B
90 105Right-handed alpha
Helix 19
19
B
136 145Right-handed alpha
Helix 20
20
B
148 169Right-handed alpha
Helix 21
21
B
177 179Right-handed 310
Helix 22
22
B
212 216Right-handed 310
Helix 23
23
B
217 223Right-handed 310
Helix 24
24
B
228 246Right-handed alpha
Helix 25
25
B
254 265Right-handed alpha
Helix 26
26
B
274 285Right-handed alpha
Helix 27
27
B
288 292Right-handed 310
Helix 28
28
B
294 299Right-handed alpha
Helix 29
29
B
300 301Right-handed 310
Helix 30
30
B
302 306Right-handed 310
Helix 31
31
B
325 336Right-handed alpha
Helix 32
32
B
338 348Right-handed alpha
Helix 33
33
B
352 361Right-handed alpha
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There are 4 sheets in PDB entry 1ZMW. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 61first strand
Strand 2
A
65 72anti-parallel
Strand 3
A
78 85anti-parallel
Strand 4
A
124 129anti-parallel
Strand 5
A
115 120anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 183first strand
Strand 2
A
189 191anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 61first strand
Strand 2
B
65 72anti-parallel
Strand 3
B
78 85anti-parallel
Strand 4
B
124 129anti-parallel
Strand 5
B
115 120anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 183first strand
Strand 2
B
189 191anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il