Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZO8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1ZO8 entry

There are 16 chains in PDB entry 1ZO8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	PRO 253
B	SER 2	PRO 253
C	SER 2	PRO 253
D	SER 2	PRO 253
E	SER 2	PRO 253
F	SER 2	PRO 253
G	SER 2	PRO 253
H	SER 2	PRO 253
I	SER 2	PRO 253
J	SER 2	PRO 253
K	SER 2	PRO 253
L	SER 2	PRO 253
M	SER 2	PRO 253
N	SER 2	PRO 253
O	SER 2	PRO 253
P	SER 2	PRO 253

There are213 helices in PDB entry 1ZO8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	13	24	Right-handed alpha
Helix 2	2	A	32	36	Right-handed 310
Helix 3	3	A	37	48	Right-handed alpha
Helix 4	4	A	58	71	Right-handed alpha
Helix 5	5	A	88	92	Right-handed 310
Helix 6	6	A	93	105	Right-handed alpha
Helix 7	7	A	105	123	Right-handed alpha
Helix 8	8	A	142	164	Right-handed alpha
Helix 9	9	A	165	167	Right-handed 310
Helix 10	10	A	188	193	Right-handed alpha
Helix 11	11	A	195	206	Right-handed alpha
Helix 12	12	A	213	226	Right-handed alpha
Helix 13	13	A	229	233	Right-handed 310
Helix 14	14	B	13	24	Right-handed alpha
Helix 15	15	B	32	36	Right-handed 310
Helix 16	16	B	37	48	Right-handed alpha
Helix 17	17	B	58	71	Right-handed alpha
Helix 18	18	B	88	92	Right-handed 310
Helix 19	19	B	93	105	Right-handed alpha
Helix 20	20	B	105	123	Right-handed alpha
Helix 21	21	B	142	164	Right-handed alpha
Helix 22	22	B	165	167	Right-handed 310
Helix 23	23	B	189	193	Right-handed alpha
Helix 24	24	B	195	206	Right-handed alpha
Helix 25	25	B	213	227	Right-handed alpha
Helix 26	26	B	229	233	Right-handed 310
Helix 27	27	C	13	24	Right-handed alpha
Helix 28	28	C	32	36	Right-handed 310
Helix 29	29	C	37	48	Right-handed alpha
Helix 30	30	C	58	71	Right-handed alpha
Helix 31	31	C	88	92	Right-handed 310
Helix 32	32	C	93	105	Right-handed alpha
Helix 33	33	C	105	123	Right-handed alpha
Helix 34	34	C	133	137	Right-handed 310
Helix 35	35	C	142	164	Right-handed alpha
Helix 36	36	C	165	167	Right-handed 310
Helix 37	37	C	188	193	Right-handed alpha
Helix 38	38	C	195	206	Right-handed alpha
Helix 39	39	C	213	226	Right-handed alpha
Helix 40	40	C	229	233	Right-handed 310
Helix 41	41	D	13	24	Right-handed alpha
Helix 42	42	D	32	36	Right-handed 310
Helix 43	43	D	37	48	Right-handed alpha
Helix 44	44	D	58	71	Right-handed alpha
Helix 45	45	D	88	92	Right-handed 310
Helix 46	46	D	93	105	Right-handed alpha
Helix 47	47	D	105	123	Right-handed alpha
Helix 48	48	D	133	137	Right-handed 310
Helix 49	49	D	142	164	Right-handed alpha
Helix 50	50	D	165	167	Right-handed 310
Helix 51	51	D	188	193	Right-handed alpha
Helix 52	52	D	195	206	Right-handed alpha
Helix 53	53	D	213	226	Right-handed alpha
Helix 54	54	D	229	233	Right-handed 310
Helix 55	55	E	13	24	Right-handed alpha
Helix 56	56	E	32	36	Right-handed 310
Helix 57	57	E	37	48	Right-handed alpha
Helix 58	58	E	58	71	Right-handed alpha
Helix 59	59	E	88	92	Right-handed 310
Helix 60	60	E	93	105	Right-handed alpha
Helix 61	61	E	105	123	Right-handed alpha
Helix 62	62	E	142	164	Right-handed alpha
Helix 63	63	E	165	167	Right-handed 310
Helix 64	64	E	189	193	Right-handed alpha
Helix 65	65	E	195	206	Right-handed alpha
Helix 66	66	E	213	227	Right-handed alpha
Helix 67	67	E	229	233	Right-handed 310
Helix 68	68	F	13	24	Right-handed alpha
Helix 69	69	F	32	36	Right-handed 310
Helix 70	70	F	37	48	Right-handed alpha
Helix 71	71	F	58	71	Right-handed alpha
Helix 72	72	F	88	92	Right-handed 310
Helix 73	73	F	93	105	Right-handed alpha
Helix 74	74	F	105	123	Right-handed alpha
Helix 75	75	F	142	164	Right-handed alpha
Helix 76	76	F	165	167	Right-handed 310
Helix 77	77	F	189	193	Right-handed alpha
Helix 78	78	F	195	206	Right-handed alpha
Helix 79	79	F	213	226	Right-handed alpha
Helix 80	80	F	229	233	Right-handed 310
Helix 81	81	G	13	24	Right-handed alpha
Helix 82	82	G	32	36	Right-handed 310
Helix 83	83	G	37	48	Right-handed alpha
Helix 84	84	G	58	71	Right-handed alpha
Helix 85	85	G	88	92	Right-handed 310
Helix 86	86	G	93	105	Right-handed alpha
Helix 87	87	G	105	123	Right-handed alpha
Helix 88	88	G	142	164	Right-handed alpha
Helix 89	89	G	165	167	Right-handed 310
Helix 90	90	G	189	193	Right-handed alpha
Helix 91	91	G	195	206	Right-handed alpha
Helix 92	92	G	213	226	Right-handed alpha
Helix 93	93	G	229	233	Right-handed 310
Helix 94	94	H	13	24	Right-handed alpha
Helix 95	95	H	32	36	Right-handed 310
Helix 96	96	H	37	48	Right-handed alpha
Helix 97	97	H	58	71	Right-handed alpha
Helix 98	98	H	88	92	Right-handed 310
Helix 99	99	H	93	105	Right-handed alpha
Helix 100	100	H	105	123	Right-handed alpha
Helix 101	101	H	142	164	Right-handed alpha
Helix 102	102	H	165	167	Right-handed 310
Helix 103	103	H	188	193	Right-handed alpha
Helix 104	104	H	195	206	Right-handed alpha
Helix 105	105	H	213	226	Right-handed alpha
Helix 106	106	H	229	233	Right-handed 310
Helix 107	107	I	13	24	Right-handed alpha
Helix 108	108	I	32	36	Right-handed 310
Helix 109	109	I	37	48	Right-handed alpha
Helix 110	110	I	58	71	Right-handed alpha
Helix 111	111	I	88	92	Right-handed 310
Helix 112	112	I	93	105	Right-handed alpha
Helix 113	113	I	105	123	Right-handed alpha
Helix 114	114	I	142	164	Right-handed alpha
Helix 115	115	I	165	167	Right-handed 310
Helix 116	116	I	188	193	Right-handed alpha
Helix 117	117	I	195	206	Right-handed alpha
Helix 118	118	I	213	226	Right-handed alpha
Helix 119	119	I	229	233	Right-handed 310
Helix 120	120	J	13	24	Right-handed alpha
Helix 121	121	J	32	36	Right-handed 310
Helix 122	122	J	37	48	Right-handed alpha
Helix 123	123	J	58	71	Right-handed alpha
Helix 124	124	J	88	92	Right-handed 310
Helix 125	125	J	93	105	Right-handed alpha
Helix 126	126	J	105	123	Right-handed alpha
Helix 127	127	J	133	137	Right-handed 310
Helix 128	128	J	142	164	Right-handed alpha
Helix 129	129	J	165	167	Right-handed 310
Helix 130	130	J	189	193	Right-handed alpha
Helix 131	131	J	195	206	Right-handed alpha
Helix 132	132	J	213	226	Right-handed alpha
Helix 133	133	J	229	233	Right-handed 310
Helix 134	134	K	13	24	Right-handed alpha
Helix 135	135	K	32	36	Right-handed 310
Helix 136	136	K	37	48	Right-handed alpha
Helix 137	137	K	58	71	Right-handed alpha
Helix 138	138	K	88	92	Right-handed 310
Helix 139	139	K	93	105	Right-handed alpha
Helix 140	140	K	105	123	Right-handed alpha
Helix 141	141	K	133	137	Right-handed 310
Helix 142	142	K	142	164	Right-handed alpha
Helix 143	143	K	165	167	Right-handed 310
Helix 144	144	K	189	193	Right-handed alpha
Helix 145	145	K	195	206	Right-handed alpha
Helix 146	146	K	213	226	Right-handed alpha
Helix 147	147	K	229	233	Right-handed 310
Helix 148	148	L	13	24	Right-handed alpha
Helix 149	149	L	32	36	Right-handed 310
Helix 150	150	L	37	48	Right-handed alpha
Helix 151	151	L	58	71	Right-handed alpha
Helix 152	152	L	88	92	Right-handed 310
Helix 153	153	L	93	105	Right-handed alpha
Helix 154	154	L	105	123	Right-handed alpha
Helix 155	155	L	142	164	Right-handed alpha
Helix 156	156	L	165	167	Right-handed 310
Helix 157	157	L	188	193	Right-handed alpha
Helix 158	158	L	195	206	Right-handed alpha
Helix 159	159	L	213	226	Right-handed alpha
Helix 160	160	L	229	233	Right-handed 310
Helix 161	161	M	13	24	Right-handed alpha
Helix 162	162	M	32	36	Right-handed 310
Helix 163	163	M	37	48	Right-handed alpha
Helix 164	164	M	58	71	Right-handed alpha
Helix 165	165	M	93	105	Right-handed alpha
Helix 166	166	M	105	123	Right-handed alpha
Helix 167	167	M	133	137	Right-handed 310
Helix 168	168	M	142	164	Right-handed alpha
Helix 169	169	M	165	167	Right-handed 310
Helix 170	170	M	189	193	Right-handed alpha
Helix 171	171	M	195	206	Right-handed alpha
Helix 172	172	M	213	226	Right-handed alpha
Helix 173	173	M	229	233	Right-handed 310
Helix 174	174	N	13	24	Right-handed alpha
Helix 175	175	N	32	36	Right-handed 310
Helix 176	176	N	37	48	Right-handed alpha
Helix 177	177	N	58	71	Right-handed alpha
Helix 178	178	N	88	92	Right-handed 310
Helix 179	179	N	93	105	Right-handed alpha
Helix 180	180	N	105	123	Right-handed alpha
Helix 181	181	N	142	164	Right-handed alpha
Helix 182	182	N	165	167	Right-handed 310
Helix 183	183	N	189	193	Right-handed alpha
Helix 184	184	N	195	206	Right-handed alpha
Helix 185	185	N	213	226	Right-handed alpha
Helix 186	186	N	229	233	Right-handed 310
Helix 187	187	O	13	24	Right-handed alpha
Helix 188	188	O	32	36	Right-handed 310
Helix 189	189	O	37	48	Right-handed alpha
Helix 190	190	O	58	71	Right-handed alpha
Helix 191	191	O	88	92	Right-handed 310
Helix 192	192	O	93	105	Right-handed alpha
Helix 193	193	O	105	123	Right-handed alpha
Helix 194	194	O	142	164	Right-handed alpha
Helix 195	195	O	165	167	Right-handed 310
Helix 196	196	O	189	193	Right-handed alpha
Helix 197	197	O	195	206	Right-handed alpha
Helix 198	198	O	213	226	Right-handed alpha
Helix 199	199	O	229	233	Right-handed 310
Helix 200	200	P	13	24	Right-handed alpha
Helix 201	201	P	32	36	Right-handed 310
Helix 202	202	P	37	48	Right-handed alpha
Helix 203	203	P	58	71	Right-handed alpha
Helix 204	204	P	88	92	Right-handed 310
Helix 205	205	P	93	105	Right-handed alpha
Helix 206	206	P	105	123	Right-handed alpha
Helix 207	207	P	133	137	Right-handed 310
Helix 208	208	P	142	164	Right-handed alpha
Helix 209	209	P	165	167	Right-handed 310
Helix 210	210	P	188	193	Right-handed alpha
Helix 211	211	P	195	206	Right-handed alpha
Helix 212	212	P	213	226	Right-handed alpha
Helix 213	213	P	229	233	Right-handed 310

There are 25 sheets in PDB entry 1ZO8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	53	first strand
Strand 2	A	27	30	parallel
Strand 3	A	3	6	parallel
Strand 4	A	75	79	parallel
Strand 5	A	126	130	parallel
Strand 6	A	170	175	parallel
Strand 7	A	236	239	parallel

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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	53	first strand
Strand 2	B	27	30	parallel
Strand 3	B	3	6	parallel
Strand 4	B	75	79	parallel
Strand 5	B	126	130	parallel
Strand 6	B	170	175	parallel
Strand 7	B	236	239	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	179	181	first strand
Strand 2	B	187	188	parallel

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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	53	first strand
Strand 2	C	27	30	parallel
Strand 3	C	3	6	parallel
Strand 4	C	75	79	parallel
Strand 5	C	126	130	parallel
Strand 6	C	170	175	parallel
Strand 7	C	236	239	parallel

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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	53	first strand
Strand 2	D	27	30	parallel
Strand 3	D	3	6	parallel
Strand 4	D	75	79	parallel
Strand 5	D	126	130	parallel
Strand 6	D	170	175	parallel
Strand 7	D	236	239	parallel

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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	53	first strand
Strand 2	E	27	30	parallel
Strand 3	E	3	6	parallel
Strand 4	E	75	79	parallel
Strand 5	E	126	130	parallel
Strand 6	E	170	175	parallel
Strand 7	E	236	239	parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	179	181	first strand
Strand 2	E	187	188	parallel

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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	51	53	first strand
Strand 2	F	27	30	parallel
Strand 3	F	3	6	parallel
Strand 4	F	75	79	parallel
Strand 5	F	126	130	parallel
Strand 6	F	170	175	parallel
Strand 7	F	236	239	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	179	181	first strand
Strand 2	F	187	188	parallel

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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	51	53	first strand
Strand 2	G	27	30	parallel
Strand 3	G	3	6	parallel
Strand 4	G	75	79	parallel
Strand 5	G	126	130	parallel
Strand 6	G	170	175	parallel
Strand 7	G	236	239	parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	179	181	first strand
Strand 2	G	187	188	parallel

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There are 7 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	52	53	first strand
Strand 2	H	27	30	parallel
Strand 3	H	3	6	parallel
Strand 4	H	75	79	parallel
Strand 5	H	126	130	parallel
Strand 6	H	170	175	parallel
Strand 7	H	236	239	parallel

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There are 7 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	51	53	first strand
Strand 2	I	27	30	parallel
Strand 3	I	3	6	parallel
Strand 4	I	75	79	parallel
Strand 5	I	126	130	parallel
Strand 6	I	170	175	parallel
Strand 7	I	236	239	parallel

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There are 7 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	51	53	first strand
Strand 2	J	27	30	parallel
Strand 3	J	3	6	parallel
Strand 4	J	75	79	parallel
Strand 5	J	126	130	parallel
Strand 6	J	170	175	parallel
Strand 7	J	236	239	parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	179	181	first strand
Strand 2	J	187	188	parallel

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There are 7 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	51	53	first strand
Strand 2	K	27	30	parallel
Strand 3	K	3	6	parallel
Strand 4	K	75	79	parallel
Strand 5	K	126	130	parallel
Strand 6	K	170	175	parallel
Strand 7	K	236	239	parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	179	181	first strand
Strand 2	K	187	188	parallel

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There are 7 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	51	53	first strand
Strand 2	L	27	30	parallel
Strand 3	L	3	6	parallel
Strand 4	L	75	79	parallel
Strand 5	L	126	130	parallel
Strand 6	L	170	175	parallel
Strand 7	L	236	239	parallel

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There are 7 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	51	53	first strand
Strand 2	M	27	30	parallel
Strand 3	M	3	6	parallel
Strand 4	M	75	79	parallel
Strand 5	M	126	130	parallel
Strand 6	M	170	175	parallel
Strand 7	M	236	239	parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	179	181	first strand
Strand 2	M	187	188	parallel

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There are 7 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	51	53	first strand
Strand 2	N	27	30	parallel
Strand 3	N	3	6	parallel
Strand 4	N	75	79	parallel
Strand 5	N	126	130	parallel
Strand 6	N	170	175	parallel
Strand 7	N	236	239	parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	179	181	first strand
Strand 2	N	187	188	parallel

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There are 7 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	51	53	first strand
Strand 2	O	27	30	parallel
Strand 3	O	3	6	parallel
Strand 4	O	75	79	parallel
Strand 5	O	126	130	parallel
Strand 6	O	170	175	parallel
Strand 7	O	236	239	parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	179	181	first strand
Strand 2	O	187	188	parallel

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There are 7 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	51	53	first strand
Strand 2	P	27	30	parallel
Strand 3	P	3	6	parallel
Strand 4	P	75	79	parallel
Strand 5	P	126	130	parallel
Strand 6	P	170	175	parallel
Strand 7	P	236	239	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1ZO8

Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZO8