Analysis of interatomic Contacts of Structural Units in PDB entry:
1ZP7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ZP7 entry

There are 2 chains in PDB entry 1ZP7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 34SER 199
B
 THR 34PRO 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 1ZP7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 49Right-handed alpha
Helix 2
2
A
114 116Right-handed 310
Helix 3
3
A
117 130Right-handed alpha
Helix 4
4
A
149 158Right-handed alpha
Helix 5
5
A
159 161Right-handed 310
Helix 6
6
A
169 176Right-handed alpha
Helix 7
7
A
188 198Right-handed alpha
Helix 8
8
B
34 49Right-handed alpha
Helix 9
9
B
114 116Right-handed 310
Helix 10
10
B
117 130Right-handed alpha
Helix 11
11
B
149 158Right-handed alpha
Helix 12
12
B
169 176Right-handed alpha
Helix 13
13
B
188 198Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 1ZP7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
89 93anti-parallel
Strand 3
A
96 104anti-parallel
Strand 4
A
133 140parallel
Strand 5
A
143 148anti-parallel
Strand 6
A
177 178anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
166 168anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
B
89 93anti-parallel
Strand 3
B
96 104anti-parallel
Strand 4
B
133 140parallel
Strand 5
B
143 148anti-parallel
Strand 6
B
177 178anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 62first strand
Strand 2
B
80 81anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 112first strand
Strand 2
B
166 168anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il